RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TAF13Q15543 124 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 OR6V1Q8N148 313 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 OR14L1PQ8NHC6 308 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 UCN2Q96RP3 112 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 NEURL2Q9BR09 285 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 SARGQ9BW04 601 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 SMURF1Q9HCE7 757 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 HPF1Q9NWY4 346 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 EPHA6Q9UF33 1036 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 ICAM5Q9UMF0 924 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 SLC35A3Q9Y2D2 325 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 AKAP8O43823 692 aaKnown RBP9.31□□□□□ -0.92
RFFL-212ENST00000584655 GABRA4P48169 554 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 RORCP51449 518 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 KCNJ8Q15842 424 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 BAK1Q16611 211 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 WBP2NLQ6ICG8 309 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 NIPAL1Q6NVV3 410 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 DHRS4L2Q6PKH6 230 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.31□□□□□ -0.92
RFFL-212ENST00000584655 SLC35F2Q8IXU6 374 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 OR6N1Q8NGY5 312 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 OR8S1Q8NH09 359 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 ROBO4Q8WZ75 1007 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 MRTO4Q9UKD2 239 aaKnown RBP9.31□□□□□ -0.92
RFFL-212ENST00000584655 FBXL3Q9UKT7 428 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 PADI1Q9ULC6 663 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 F5H5K5 113 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 ZNF593O00488 134 aaPredicted RBP9.31□□□□□ -0.92
RFFL-212ENST00000584655 IDH3BO43837 385 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 TNFSF15O95150 251 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 IGLV3-19P01714 112 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 LIPCP11150 499 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 HOXB6P17509 224 aaKnown RBP9.31□□□□□ -0.92
RFFL-212ENST00000584655 SPI1P17947 270 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 EGR4Q05215 589 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 FUT7Q11130 342 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 FGFBP1Q14512 234 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 ZNF322Q6U7Q0 402 aaPredicted RBP9.31□□□□□ -0.92
RFFL-212ENST00000584655 COX15Q7KZN9 410 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 ZNF367Q7RTV3 350 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 FAM26EQ8N5C1 309 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 C1QTNF6Q9BXI9 259 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 SMG1Q96Q15 3661 aaKnown RBP9.31□□□□□ -0.92
RFFL-212ENST00000584655 EEF1E1O43324 174 aaKnown RBP9.31□□□□□ -0.92
RFFL-212ENST00000584655 TBX19O60806 448 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 WNT11O96014 354 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 PGCP20142 388 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 ENPP1P22413 925 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 F8A1P23610 371 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 TRIQKQ629K1 86 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 KRT77Q7Z794 578 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 PLPP7Q8NBV4 271 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 OR6Q1Q8NGQ2 317 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 CLDN23Q96B33 292 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 EXTL2Q9UBQ6 330 aa9.31□□□□□ -0.92
RFFL-212ENST00000584655 PTPRQQ9UMZ3 2332 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 TIMM50Q3ZCQ8 353 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 IRAK1BP1Q5VVH5 260 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 CNIH2Q6PI25 160 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 NRARPQ7Z6K4 114 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 JAGN1Q8N5M9 183 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 BRIX1Q8TDN6 353 aaKnown RBP9.3□□□□□ -0.92
RFFL-212ENST00000584655 SLC41A2Q96JW4 573 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 CNN2Q99439 309 aaKnown RBP9.3□□□□□ -0.92
RFFL-212ENST00000584655 WDR12Q9GZL7 423 aaKnown RBP9.3□□□□□ -0.92
RFFL-212ENST00000584655 BABAM2Q9NXR7 383 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 STMN3Q9NZ72 180 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 FOXJ2Q9P0K8 574 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 STUB1Q9UNE7 303 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 USF3Q68DE3 2245 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 EML6Q6ZMW3 1958 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 IGKV1D-42A0A075B6H8 117 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 A0A1W2PQ09 198 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 A0A1W2PR80 420 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 TCRBV16S1A1N1A0A5B0 115 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 MT-ND5P03915 603 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 SYPP08247 313 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 CTLA4P16410 223 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 CD40LGP29965 261 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 GDI2P50395 445 aaKnown RBP9.3□□□□□ -0.92
RFFL-212ENST00000584655 SPOCK1Q08629 439 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 TUBA3CQ13748 450 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 AADACL4Q5VUY2 407 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 C1orf140Q5VVS0 124 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 GARNL3Q5VVW2 1013 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 LIPNQ5VXI9 398 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 OGFOD3Q6PK18 319 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 PAMR1Q6UXH9 720 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 NUP54Q7Z3B4 507 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 TMPRSS12Q86WS5 348 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 APCDD1LQ8NCL9 501 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 TRUB1Q8WWH5 349 aaKnown RBP9.3□□□□□ -0.92
RFFL-212ENST00000584655 THAP4Q8WY91 577 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 NAT6Q93015 286 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 THOC3Q96J01 351 aaKnown RBP9.3□□□□□ -0.92
RFFL-212ENST00000584655 RNF170Q96K19 258 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 SLC30A2Q9BRI3 323 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 COL25A1Q9BXS0 654 aaPredicted RBP9.3□□□□□ -0.92
RFFL-212ENST00000584655 MFRPQ9BY79 579 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms