RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ZNF224Q9NZL3 707 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 CALML5Q9NZT1 146 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 HAO1Q9UJM8 370 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 PCDHB10Q9UN67 800 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.86□□□□□ -0.19
SREBF1-221ENST00000583080 LOC105371242A0A075B767 164 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 RFXANKO14593 260 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 PPIHO43447 177 aaKnown RBP13.85□□□□□ -0.19
SREBF1-221ENST00000583080 RP2O75695 350 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 NAT2P11245 290 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 HLA-DOBP13765 273 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 BGNP21810 368 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 GLRXP35754 106 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 PTDSS1P48651 473 aaKnown RBP13.85□□□□□ -0.19
SREBF1-221ENST00000583080 ARFIP2P53365 341 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 AQP5P55064 265 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 FXNQ16595 210 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 FAHD2BQ6P2I3 314 aaPredicted RBP13.85□□□□□ -0.19
SREBF1-221ENST00000583080 C6orf89Q6UWU4 347 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 ZNF813Q6ZN06 617 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 C20orf196Q8IYI0 205 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 SGMS2Q8NHU3 365 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 VPS33AQ96AX1 596 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 FAHD2AQ96GK7 314 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 EMC6Q9BV81 110 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 RSPO3Q9BXY4 272 aaPredicted RBP13.85□□□□□ -0.19
SREBF1-221ENST00000583080 MS4A5Q9H3V2 200 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 PRDM4Q9UKN5 801 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 GPR45Q9Y5Y3 372 aa13.85□□□□□ -0.19
SREBF1-221ENST00000583080 TRIM77I1YAP6 450 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 AKAP8O43823 692 aaKnown RBP13.84□□□□□ -0.19
SREBF1-221ENST00000583080 PNPP00491 289 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 NUDT7P0C024 238 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 HTR2AP28223 471 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 GIPRP48546 466 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 SCGB2A2Q13296 93 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 MFSD13AQ14CX5 517 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 TRMT5Q32P41 509 aaKnown RBP13.84□□□□□ -0.19
SREBF1-221ENST00000583080 ALKBH6Q3KRA9 238 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 ZNF311Q5JNZ3 666 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 FAM69AQ5T7M9 428 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 COMTD1Q86VU5 262 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.84□□□□□ -0.19
SREBF1-221ENST00000583080 ROPN1BQ9BZX4 212 aaPredicted RBP13.84□□□□□ -0.19
SREBF1-221ENST00000583080 ROPN1Q9HAT0 212 aaPredicted RBP13.84□□□□□ -0.19
SREBF1-221ENST00000583080 TPT1P8Q9HAU6 139 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 G6PC2Q9NQR9 355 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 MED29Q9NX70 200 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 KLHL14Q9P2G3 628 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 NOX1Q9Y5S8 564 aa13.84□□□□□ -0.19
SREBF1-221ENST00000583080 TRAV20A0A0B4J274 112 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 A0A1B0GWA3 101 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 A0A1W2PPW3 197 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 MS4A18H0YCH9 400 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 BIRC5O15392 142 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 MAGEB1P43366 347 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 LRRC74AQ0VAA2 488 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 MS4A18Q3C1V0 323 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 AVPI1Q5T686 147 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 GKAP1Q5VSY0 366 aaPredicted RBP13.83□□□□□ -0.2
SREBF1-221ENST00000583080 USP43Q70EL4 1123 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 H1FNTQ75WM6 255 aaPredicted RBP13.83□□□□□ -0.2
SREBF1-221ENST00000583080 UEVLDQ8IX04 471 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 SLC38A4Q969I6 547 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 MAL2Q969L2 176 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 TXNDC15Q96J42 360 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 ZBTB18Q99592 522 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 SLC6A7Q99884 636 aa13.83□□□□□ -0.2
SREBF1-221ENST00000583080 RBM4Q9BWF3 364 aaKnown RBP13.83□□□□□ -0.2
SREBF1-221ENST00000583080 WDR55Q9H6Y2 383 aaPredicted RBP13.83□□□□□ -0.2
SREBF1-221ENST00000583080 TRAV36DV7A0A075B6V5 113 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 A0A0G2JPF8 293 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 LOC102725191A0A1B0GVB3 256 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 HNRNPCL2B2RXH8 293 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 HNRNPCL3B7ZW38 293 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 OR2T1O43869 369 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 HNRNPCL1O60812 293 aaKnown RBP13.82□□□□□ -0.2
SREBF1-221ENST00000583080 RAB36O95755 333 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 PATE4P0C8F1 98 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 HNRNPCL4P0DMR1 293 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 ADRA2CP18825 462 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 EPHA3P29320 983 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 TMEM33P57088 247 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 RPS23P62266 143 aaKnown RBP13.82□□□□□ -0.2
SREBF1-221ENST00000583080 VSNL1P62760 191 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 GALK2Q01415 458 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 RAB39AQ14964 217 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 AWAT1Q58HT5 328 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 ZNF627Q7L945 461 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 ZNF584Q8IVC4 421 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 ADPRHL1Q8NDY3 354 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 ULBP2Q9BZM5 246 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 ARMC7Q9H6L4 198 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 CACYBPQ9HB71 228 aaKnown RBP13.82□□□□□ -0.2
SREBF1-221ENST00000583080 ESM1Q9NQ30 184 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 RPS6KB2Q9UBS0 482 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 DUSP13Q9UII6 198 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 ZNF232Q9UNY5 417 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 POFUT2Q9Y2G5 429 aa13.82□□□□□ -0.2
SREBF1-221ENST00000583080 IFT52Q9Y366 437 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms