RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 ZP4Q12836 540 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 FOXD4Q12950 439 aaPredicted RBP8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 TBRG1Q3YBR2 411 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 PHYHD1Q5SRE7 291 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 SHEQ5VZ18 495 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 HMBOX1Q6NT76 420 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 KLHL17Q6TDP4 642 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 CBLL1Q75N03 491 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 SLC46A3Q7Z3Q1 461 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 WDFY1Q8IWB7 410 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 GPR137CQ8N3F9 429 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 PIK3C3Q8NEB9 887 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 WFDC11Q8NEX6 87 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 SMAP2Q8WU79 429 aaPredicted RBP8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 TMEM255BQ8WV15 326 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 TMEM171Q8WVE6 324 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 TMEM239Q8WW34 195 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 BCL2L2Q92843 193 aaPredicted RBP8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 ZNF837Q96EG3 531 aaPredicted RBP8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 RADILQ96JH8 1075 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 LRR1Q96L50 414 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 KCTD14Q9BQ13 255 aaPredicted RBP8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 GSX2Q9BZM3 304 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 NELFAQ9H3P2 528 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 CRLF2Q9HC73 371 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 GPR35Q9HC97 309 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 MED29Q9NX70 200 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 CISD1Q9NZ45 108 aaKnown RBP8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 ZNF229Q9UJW7 825 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 MGAT4BQ9UQ53 548 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 LAMP3Q9UQV4 416 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 ARL2BPQ9Y2Y0 163 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 MAGED1Q9Y5V3 778 aaPredicted RBP8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 SNX13Q9Y5W8 968 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 CSPG4Q6UVK1 2322 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 ZANQ9Y493 2812 aa8.98□□□□□ -0.97
PPP4R1-220ENST00000581835 A0A096LPE4 126 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 ARPC4-TTLL3A0A0A6YYG9 625 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 A0A1W2PPZ6 126 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 ZNF726A6NNF4 738 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 C11orf98E9PRG8 122 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 ZNF682O95780 498 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 WNT11O96014 354 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 SERPINA1P01009 418 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 IGF2P01344 180 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 SOD3P08294 240 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 HOXB1P14653 301 aaPredicted RBP8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 PAX1P15863 534 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 NCK1P16333 377 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 FUT1P19526 365 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 PTH2RP49190 550 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 SH3BGRP55822 239 aaPredicted RBP8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 ARF1P84077 181 aaKnown RBP8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 SPOCK1Q08629 439 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 ST3GAL3Q11203 375 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 CAMK2DQ13557 499 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 CEACAM16Q2WEN9 425 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 PGGHGQ32M88 737 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 CARD17Q5XLA6 110 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 C20orf196Q8IYI0 205 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 PFN4Q8NHR9 129 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 MAGEE2Q8TD90 523 aaPredicted RBP8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 PERPQ96FX8 193 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 PRRC1Q96M27 445 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 HS6ST2Q96MM7 605 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 LRRC37BQ96QE4 947 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 CXorf56Q9H5V9 222 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 SPAG4Q9NPE6 437 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 OBP2BQ9NPH6 170 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 C20orf141Q9NUB4 165 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 ZNF701Q9NV72 531 aaPredicted RBP8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 ARL8BQ9NVJ2 186 aa8.97□□□□□ -0.97
PPP4R1-220ENST00000581835 ZNF99A8MXY4 864 aaPredicted RBP8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 E7EQL1 145 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 BLOC1S5-TXNDC5H3BN57 136 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 J3KTA2 159 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 M0R3G1 203 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 OVOL3O00110 214 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 FFAR1O14842 300 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 ARHGEF9O43307 516 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 RNF13O43567 381 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 SERPINI2O75830 405 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 DCTN3O75935 186 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 CD8AP01732 235 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 HIST1H2ABP04908 130 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 IFNW1P05000 195 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 UMPSP11172 480 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 IFNGR1P15260 489 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 FUT4P22083 530 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 PAX7P23759 505 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 IFNA8P32881 189 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 YAP1P46937 504 aaKnown RBP8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 CDH11P55287 796 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 BIDP55957 195 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 UBE2NP61088 152 aaKnown RBP8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 RPS4XP62701 263 aaKnown RBP8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 TUBA1BP68363 451 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 TUBA4AP68366 448 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 IFI44LQ53G44 452 aa8.96□□□□□ -0.98
PPP4R1-220ENST00000581835 Q5PR19 223 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms