RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 C1QTNF12Q5T7M4 302 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 HIST3H2AQ7L7L0 130 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 SLC46A3Q7Z3Q1 461 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 WDFY1Q8IWB7 410 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 LRRC75A-AS1Q8N1F1 130 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 ANKK1Q8NFD2 765 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 PFN4Q8NHR9 129 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 TMEM239Q8WW34 195 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 HIST1H2ACQ93077 130 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 PRRC1Q96M27 445 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 ADA2Q9NZK5 511 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 A4GNTQ9UNA3 340 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 MGAT4BQ9UQ53 548 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 MAGED1Q9Y5V3 778 aaPredicted RBP23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 DCTN3O75935 186 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 WNT11O96014 354 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 ASAH2BP0C7U1 165 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 UMPSP11172 480 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 SH3BGRP55822 239 aaPredicted RBP23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 PHYHD1Q5SRE7 291 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 KRTAP1-3Q8IUG1 177 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 C20orf196Q8IYI0 205 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 PIAS4Q8N2W9 510 aaPredicted RBP23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 TMEM171Q8WVE6 324 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 FAM162AQ96A26 154 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 ZNF837Q96EG3 531 aaPredicted RBP23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 HS6ST2Q96MM7 605 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 CCT8L2Q96SF2 557 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 CRLF2Q9HC73 371 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 OBP2BQ9NPH6 170 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 ARL8BQ9NVJ2 186 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 TAGLN3Q9UI15 199 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 LAMP3Q9UQV4 416 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 SNX13Q9Y5W8 968 aa23.09■■□□□ 1.29
PPP4R1-204ENST00000577393 A0A096LPE4 126 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 A0A1W2PPZ6 126 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 ZNF726A6NNF4 738 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 M0R3G1 203 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 IFNW1P05000 195 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 YAP1P46937 504 aaKnown RBP23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 ARF1P84077 181 aaKnown RBP23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 SPOCK1Q08629 439 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 ST3GAL3Q11203 375 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 CEACAM16Q2WEN9 425 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 IFI44LQ53G44 452 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 ANKRD16Q6P6B7 361 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 FKBP9P1Q75LS8 142 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 WFDC11Q8NEX6 87 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 SMAP2Q8WU79 429 aaPredicted RBP23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 GEMIN6Q8WXD5 167 aaKnown RBP23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 RADILQ96JH8 1075 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 HSH2DQ96JZ2 352 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 LRR1Q96L50 414 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 TMUB1Q9BVT8 246 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 NELFAQ9H3P2 528 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 C20orf141Q9NUB4 165 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 CISD1Q9NZ45 108 aaKnown RBP23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 EGFL7Q9UHF1 273 aa23.08■■□□□ 1.29
PPP4R1-204ENST00000577393 USF3Q68DE3 2245 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 RNF13O43567 381 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 SOD3P08294 240 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 DANCRP0C864 163 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 IFNGR1P15260 489 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 FUT1P19526 365 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 FUT4P22083 530 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 IFNA8P32881 189 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 CDH11P55287 796 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 UBE2NP61088 152 aaKnown RBP23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 CAMK2DQ13557 499 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 SLC22A25Q6T423 547 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 NANOGNBQ7Z5D8 188 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 RNF148Q8N7C7 305 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 MAGEE2Q8TD90 523 aaPredicted RBP23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 SGTBQ96EQ0 304 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 PERPQ96FX8 193 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 MED31Q9Y3C7 131 aa23.07■■□□□ 1.28
PPP4R1-204ENST00000577393 J3KTA2 159 aa23.06■■□□□ 1.28
PPP4R1-204ENST00000577393 OR7A10O76100 309 aa23.06■■□□□ 1.28
PPP4R1-204ENST00000577393 IGF2P01344 180 aa23.06■■□□□ 1.28
PPP4R1-204ENST00000577393 CD99P14209 185 aa23.06■■□□□ 1.28
PPP4R1-204ENST00000577393 BIDP55957 195 aa23.06■■□□□ 1.28
PPP4R1-204ENST00000577393 PGGHGQ32M88 737 aa23.06■■□□□ 1.28
PPP4R1-204ENST00000577393 SHEQ5VZ18 495 aa23.06■■□□□ 1.28
PPP4R1-204ENST00000577393 GLYATQ6IB77 296 aa23.06■■□□□ 1.28
PPP4R1-204ENST00000577393 SLC35D2Q76EJ3 337 aa23.06■■□□□ 1.28
PPP4R1-204ENST00000577393 ANKS4BQ8N8V4 417 aa23.06■■□□□ 1.28
PPP4R1-204ENST00000577393 CXorf56Q9H5V9 222 aa23.06■■□□□ 1.28
PPP4R1-204ENST00000577393 RHCGQ9UBD6 479 aa23.06■■□□□ 1.28
PPP4R1-204ENST00000577393 HEATR1Q9H583 2144 aaKnown RBP23.06■■□□□ 1.28
PPP4R1-204ENST00000577393 VPS13CQ709C8 3753 aa23.05■■□□□ 1.28
PPP4R1-204ENST00000577393 ARPC4-TTLL3A0A0A6YYG9 625 aa23.05■■□□□ 1.28
PPP4R1-204ENST00000577393 BLOC1S5-TXNDC5H3BN57 136 aa23.05■■□□□ 1.28
PPP4R1-204ENST00000577393 ARHGEF9O43307 516 aa23.05■■□□□ 1.28
PPP4R1-204ENST00000577393 TMCC2O75069 709 aa23.05■■□□□ 1.28
PPP4R1-204ENST00000577393 HOXB1P14653 301 aaPredicted RBP23.05■■□□□ 1.28
PPP4R1-204ENST00000577393 PTH2RP49190 550 aa23.05■■□□□ 1.28
PPP4R1-204ENST00000577393 RPS4XP62701 263 aaKnown RBP23.05■■□□□ 1.28
PPP4R1-204ENST00000577393 TUBA1BP68363 451 aa23.05■■□□□ 1.28
PPP4R1-204ENST00000577393 TUBA4AP68366 448 aa23.05■■□□□ 1.28
PPP4R1-204ENST00000577393 TUBA1AQ71U36 451 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms