RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 OR14J1Q9UGF5 321 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 NPIPA1Q9UND3 350 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 ERVW-1Q9UQF0 538 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 A0A1B0GVG6 124 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 SHISA8B8ZZ34 492 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 UPK1AO00322 258 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 B4GAT1O43505 415 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 PI15O43692 258 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 NUAK1O60285 661 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 C1QCP02747 245 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 IL6P05231 212 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 C8GP07360 202 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 CTSLP07711 333 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 CNR1P21554 472 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 YAP1P46937 504 aaKnown RBP9.59□□□□□ -0.87
UBFD1-205ENST00000566136 CCT3P49368 545 aaKnown RBP9.59□□□□□ -0.87
UBFD1-205ENST00000566136 HLCSP50747 726 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 CDK3Q00526 305 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 E2F1Q01094 437 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 CHRNB3Q05901 458 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 HEPACAMQ14CZ8 416 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 ZNF528Q3MIS6 628 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 RHBDD2Q6NTF9 364 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 HS3ST5Q8IZT8 346 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 OR1J2Q8NGS2 313 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 CA5BP1Q8WTZ4 195 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 COQ2Q96H96 371 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 PEX11GQ96HA9 241 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 RPP25Q9BUL9 199 aaKnown RBP9.59□□□□□ -0.87
UBFD1-205ENST00000566136 BDH2Q9BUT1 245 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 NARFLQ9H6Q4 476 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 ACSS1Q9NUB1 689 aaPredicted RBP9.59□□□□□ -0.87
UBFD1-205ENST00000566136 IMP3Q9NV31 184 aaKnown RBP9.59□□□□□ -0.87
UBFD1-205ENST00000566136 SH2B3Q9UQQ2 575 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 AP3M1Q9Y2T2 418 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 TSSC4Q9Y5U2 329 aaPredicted RBP9.59□□□□□ -0.87
UBFD1-205ENST00000566136 A3GALT2U3KPV4 340 aa9.59□□□□□ -0.87
UBFD1-205ENST00000566136 RAB3DO95716 219 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 AMD1P17707 334 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 SDC1P18827 310 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 POLR2EP19388 210 aaKnown RBP9.58□□□□□ -0.88
UBFD1-205ENST00000566136 FPR3P25089 353 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 S100A3P33764 101 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 ALDH3B2P48448 385 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 CCSMST1Q4G0I0 132 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 LYSMD4Q5XG99 296 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 MOB3AQ96BX8 217 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 PELI1Q96FA3 418 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 URGCP-MRPS24S4R325 110 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 WDR87Q6ZQQ6 2873 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 DMDP11532 3685 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 MARCH11A6NNE9 402 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 E5RGE8 158 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 CXCR6O00574 342 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 EFNA1P20827 205 aaPredicted RBP9.58□□□□□ -0.88
UBFD1-205ENST00000566136 ACKR3P25106 362 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 DUTP33316 252 aaKnown RBP9.58□□□□□ -0.88
UBFD1-205ENST00000566136 BDKRB1P46663 353 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 CTSCP53634 463 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 EMP2P54851 167 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 PIGFQ07326 219 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 HTR4Q13639 388 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 AMDHD1Q96NU7 426 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 AMBRA1Q9C0C7 1298 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 SLA2Q9H6Q3 261 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 MTHFD2LQ9H903 347 aaPredicted RBP9.58□□□□□ -0.88
UBFD1-205ENST00000566136 SLC2A4RGQ9NR83 387 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 NSG2Q9Y328 171 aa9.58□□□□□ -0.88
UBFD1-205ENST00000566136 ANHXE9PGG2 379 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 GFYI3L273 518 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 SUV39H1O43463 412 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 MPC1LP0DKB6 136 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 PPIFP30405 207 aaKnown RBP9.57□□□□□ -0.88
UBFD1-205ENST00000566136 PFN3P60673 137 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 OC90Q02509 493 aaPredicted RBP9.57□□□□□ -0.88
UBFD1-205ENST00000566136 ACTBL2Q562R1 376 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 OR4F3Q6IEY1 312 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 METTL2BQ6P1Q9 378 aaKnown RBP9.57□□□□□ -0.88
UBFD1-205ENST00000566136 PARM1Q6UWI2 310 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 RNF165Q6ZSG1 346 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 SPEM1Q8N4L4 309 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 HORMAD2Q8N7B1 307 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 ZNF680Q8NEM1 530 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 OR9G4Q8NGQ1 327 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 MCOLN3Q8TDD5 553 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 FGF14Q92915 247 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 MED8Q96G25 268 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 CCDC115Q96NT0 180 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 UFSP2Q9NUQ7 469 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 ASIC5Q9NY37 505 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 HEMK1Q9Y5R4 338 aaPredicted RBP9.57□□□□□ -0.88
UBFD1-205ENST00000566136 CFAP54Q96N23 3096 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 TRBV5-3A0A0A0MS03 114 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 H0YL77 283 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 CNR2P34972 360 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 ZNF415Q09FC8 603 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 TRAM2Q15035 370 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 ZNF77Q15935 545 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 LY6G6FQ5SQ64 297 aa9.57□□□□□ -0.88
UBFD1-205ENST00000566136 PRAMEF17Q5VTA0 474 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms