RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 PAMR1Q6UXH9 720 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 ABHD12BQ7Z5M8 362 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 UEVLDQ8IX04 471 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 LIPHQ8WWY8 451 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 ACOT11Q8WXI4 607 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 CCDC124Q96CT7 223 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 PLPPR2Q96GM1 343 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 DHRS1Q96LJ7 313 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 MUS81Q96NY9 551 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 ANKRD19PQ9H560 264 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 TAS2R5Q9NYW4 299 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 RCE1Q9Y256 329 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 PLEKHA6Q9Y2H5 1048 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 NOX1Q9Y5S8 564 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 PRRC2AP48634 2157 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 A0A1W2PRQ8 180 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 HTR3EA5X5Y0 456 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 OR5H1A6NKK0 313 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 C11orf98E9PRG8 122 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 DNAJC8O75937 253 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 KRT33AO76009 404 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 ZNF432O94892 652 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 RAF1P04049 648 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 HIST1H2ABP04908 130 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 FABP3P05413 133 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 H1F0P07305 194 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 ADORA3P0DMS8 318 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 IFI30P13284 250 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 AHCYP23526 432 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 MPGP29372 298 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 POU3F1Q03052 451 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 TRAP1Q12931 704 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 DGCR6Q14129 220 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 KEAP1Q14145 624 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 PPA1Q15181 289 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 GABRA6Q16445 453 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 TBPL2Q6SJ96 375 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 HIST3H2AQ7L7L0 130 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 NANOGNBQ7Z5D8 188 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 PXKQ7Z7A4 578 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 ZDHHC21Q8IVQ6 265 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 NRMQ8IXM6 262 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 RNF113BQ8IZP6 322 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 SLC7A13Q8TCU3 470 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 HIST1H2ACQ93077 130 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 MCUR1Q96AQ8 359 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 BPIFA2Q96DR5 249 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 TXNDC15Q96J42 360 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 PIP5K1AQ99755 562 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 CADM1Q9BY67 442 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 ESRP2Q9H6T0 727 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 IL1RAPQ9NPH3 570 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 CCM2LQ9NUG4 571 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 MED13LQ71F56 2210 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 OTOGQ6ZRI0 2925 aa12.16□□□□□ -0.46
HERPUD1-210ENST00000565966 PLCE1Q9P212 2302 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 GSC2O15499 205 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 AKAP8O43823 692 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 UPK3AO75631 287 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 ATP5HO75947 161 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 OR6A2O95222 327 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 TSPAN19P0C672 248 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 MAKP20794 623 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 PRKCDQ05655 676 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 LGALS3BPQ08380 585 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 NCMAPQ5T1S8 102 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 C9orf135Q5VTT2 229 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 PODNL1Q6PEZ8 512 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 ZNF730Q6ZMV8 503 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 MBOAT2Q6ZWT7 520 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 PIWIL3Q7Z3Z3 882 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 C1orf162Q8NEQ5 155 aaPredicted RBP12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 OR2M2Q96R28 347 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 SEPHS2Q99611 448 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 FUZQ9BT04 418 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 EMC6Q9BV81 110 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 LINC00470Q9BZP3 86 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 MED29Q9NX70 200 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 AKAP9Q99996 3911 aa12.15□□□□□ -0.46
HERPUD1-210ENST00000565966 TRBV4-1A0A0J9YWV2 114 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 ZNF587BE7ETH6 402 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 BLOC1S5-TXNDC5H3BN57 136 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 RNF13O43567 381 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 SLC43A1O75387 559 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 SERPINI2O75830 405 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 ATE1O95260 518 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 CD3EP07766 207 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 AQP2P41181 271 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 MAGEA2P43356 314 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 RASSF2P50749 326 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 ART1P52961 327 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 SPIBQ01892 262 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 RPL18Q07020 188 aaKnown RBP12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 TESK1Q15569 626 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 ACKR1Q16570 336 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 FGD3Q5JSP0 725 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 C1QTNF12Q5T7M4 302 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 SEZ6L2Q6UXD5 910 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 ZNF704Q6ZNC4 412 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms