RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	ATG4D	Q86TL0	474 aa	Predicted RBP	11.98	□□□□□ -0.49
SCAPER-215	ENST00000565507	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.98	□□□□□ -0.49
SCAPER-215	ENST00000565507	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.98	□□□□□ -0.49
SCAPER-215	ENST00000565507	FRRS1L	Q9P0K9	344 aa		11.98	□□□□□ -0.49
SCAPER-215	ENST00000565507	KLHL9	Q9P2J3	617 aa		11.98	□□□□□ -0.49
SCAPER-215	ENST00000565507	ASXL3	Q9C0F0	2248 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	SULT1B1	O43704	296 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	KRT33A	O76009	404 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	ECD	O95905	644 aa	Predicted RBP	11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	CD14	P08571	375 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	PTHLH	P12272	177 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	SSTR2	P30874	369 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	VEGFC	P49767	419 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	EGR4	Q05215	589 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	SMAD4	Q13485	552 aa	Known RBP	11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	LIPN	Q5VXI9	398 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	NLRC3	Q7RTR2	1065 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	SLC16A9	Q7RTY1	509 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	OR8H3	Q8N146	312 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	EID2	Q8N6I1	236 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	SYNPR	Q8TBG9	265 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	DACT3	Q96B18	629 aa	Predicted RBP	11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	HAVCR1	Q96D42	359 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	LMAN1L	Q9HAT1	526 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	MRPS33	Q9Y291	106 aa	Known RBP	11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	SPTY2D1-AS1	A0A0U1RR47	76 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	ANKRD20A5P	A0PJZ0	165 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	NAP1L6	A6NFF2	107 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	ITGA10	O75578	1167 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	RPP14	O95059	124 aa	Known RBP	11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	APEH	P13798	732 aa	Known RBP	11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	ENPP1	P22413	925 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	ZNF81	P51508	661 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	ARPC4	P59998	168 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	LTB	Q06643	244 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507		Q499Y3	187 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	GPR139	Q6DWJ6	353 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	WBP2NL	Q6ICG8	309 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	CBLN3	Q6UW01	205 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	KCTD20	Q7Z5Y7	419 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	CCDC28A	Q8IWP9	274 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	GATS	Q8NAP1	163 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	OR2T35	Q8NGX2	323 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	LCOR	Q96JN0	433 aa	Predicted RBP	11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	CCNL2	Q96S94	520 aa	Predicted RBP	11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	OR10A4	Q9H209	315 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	METTL17	Q9H7H0	456 aa	Predicted RBP	11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	FKRP	Q9H9S5	495 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	MMP25	Q9NPA2	562 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	EIF3K	Q9UBQ5	218 aa	Known RBP	11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	ZDBF2	Q9HCK1	2354 aa		11.97	□□□□□ -0.49
SCAPER-215	ENST00000565507	MPDZ	O75970	2070 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	TRBV5-5	A0A0J9YX44	114 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507		A0A1B0GUH1	482 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	MEN1	O00255	615 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	SRPX2	O60687	465 aa	Predicted RBP	11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	ICMT	O60725	284 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	PRAF2	O60831	178 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	RAB40AL	P0C0E4	278 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	ASAH2B	P0C7U1	165 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	CALCB	P10092	127 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	CDK2	P24941	298 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	SDHA	P31040	664 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	ADH7	P40394	386 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	GRK6	P43250	576 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	P2RX1	P51575	399 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	SKP2	Q13309	424 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	ALKBH1	Q13686	389 aa	Known RBP	11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	FZD2	Q14332	565 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	UBXN2B	Q14CS0	331 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	ELOA3B	Q3SY89	546 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	SIGIRR	Q6IA17	410 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	ARMC6	Q6NXE6	501 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	APOOL	Q6UXV4	268 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	ZNF440	Q8IYI8	595 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	LSM14A	Q8ND56	463 aa	Known RBP	11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	ELOA3	Q8NG57	546 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	FCAMR	Q8WWV6	532 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	RAB40A	Q8WXH6	277 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	MARVELD3	Q96A59	401 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	NXPE2	Q96DL1	559 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	S100A16	Q96FQ6	103 aa	Known RBP	11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	RADIL	Q96JH8	1075 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	DPCD	Q9BVM2	203 aa	Predicted RBP	11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	SPRTN	Q9H040	489 aa	Predicted RBP	11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	FBXL3	Q9UKT7	428 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	MOK	Q9UQ07	419 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	SPAG17	Q6Q759	2223 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	CACNA1I	Q9P0X4	2223 aa		11.96	□□□□□ -0.49
SCAPER-215	ENST00000565507	PRAMEF26	H0Y7S4	382 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	CLDN4	O14493	209 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	NSA2	O95478	260 aa	Known RBP	11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	TXNDC12	O95881	172 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	ATXN8OS	P0DMR3	200 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	PNMT	P11086	282 aa		11.96	□□□□□ -0.5
SCAPER-215	ENST00000565507	MNDA	P41218	407 aa		11.96	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms