RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 XKRYO14609 159 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 SERPINI2O75830 405 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 HLA-DPB1P04440 258 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 CELP19835 753 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 AHCYP23526 432 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 CD82P27701 267 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 GTF2E2P29084 291 aaKnown RBP11.61□□□□□ -0.55
SNX1-211ENST00000560829 DSCR4P56555 118 aaPredicted RBP11.61□□□□□ -0.55
SNX1-211ENST00000560829 ACTA2P62736 377 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 ACTG2P63267 376 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 OR7A5Q15622 319 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 CDONQ4KMG0 1287 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 TIGD3Q6B0B8 471 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 VASH1Q7L8A9 365 aaPredicted RBP11.61□□□□□ -0.55
SNX1-211ENST00000560829 SSX6Q7RTT6 188 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 ZBTB46Q86UZ6 589 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 TMPRSS12Q86WS5 348 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 OR6V1Q8N148 313 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 GHDCQ8N2G8 530 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 OR6K6Q8NGW6 343 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 MCFD2Q8NI22 146 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 IP6K3Q96PC2 410 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 TSSK2Q96PF2 358 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 MARCH7Q9H992 704 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 CHST11Q9NPF2 352 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 FKBP7Q9Y680 259 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 OTOGLQ3ZCN5 2332 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 A0A1W2PNV4 684 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 A0A1W2PRG6 482 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 PRSS37A4D1T9 235 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 DCTN6O00399 190 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 ARHGEF9O43307 516 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 PLPP2O43688 288 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 TFPIP10646 304 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 PYCR1P32322 319 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 ACVR1BP36896 505 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 OPRL1P41146 370 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 NAA10P41227 235 aaPredicted RBP11.61□□□□□ -0.55
SNX1-211ENST00000560829 CENPAP49450 140 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 MYBPHQ13203 477 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 ATP1A4Q13733 1029 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 ZNF239Q16600 458 aaKnown RBP11.61□□□□□ -0.55
SNX1-211ENST00000560829 B3GNTL1Q67FW5 361 aaPredicted RBP11.61□□□□□ -0.55
SNX1-211ENST00000560829 SLC16A9Q7RTY1 509 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 MDGA2Q7Z553 956 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 TIGD4Q8IY51 512 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 ZFP41Q8N8Y5 198 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 ZNF248Q8NDW4 579 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 OR1J4Q8NGS1 313 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 NKD1Q969G9 470 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 TMEM203Q969S6 136 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 C4orf36Q96KX1 117 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 SYT4Q9H2B2 425 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 AKIP1Q9NQ31 210 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 SACM1LQ9NTJ5 587 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 HDGFL3Q9Y3E1 203 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 SIRT4Q9Y6E7 314 aaPredicted RBP11.61□□□□□ -0.55
SNX1-211ENST00000560829 RALGAPA1Q6GYQ0 2036 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 PCSK5Q92824 1860 aa11.61□□□□□ -0.55
SNX1-211ENST00000560829 PNMA8CA0A1B0GUJ8 204 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 SPAARA0A1B0GVQ0 90 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 H3BML4 177 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 H7C1C5 153 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 SELENOFO60613 162 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 CBR3O75828 277 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 PLGP00747 810 aaPredicted RBP11.6□□□□□ -0.55
SNX1-211ENST00000560829 IL1AP01583 271 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 DPP4P27487 766 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 OR12D2P58182 307 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 LCN6P62502 163 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 FABP5Q01469 135 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 CRTC2Q53ET0 693 aaPredicted RBP11.6□□□□□ -0.55
SNX1-211ENST00000560829 FAM205BPQ63HN1 556 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 PXKQ7Z7A4 578 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 ZNF227Q86WZ6 799 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 DTX1Q86Y01 620 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 CROCCP3Q8IVE0 287 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 RFLNBQ8N5W9 214 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 SMAP2Q8WU79 429 aaPredicted RBP11.6□□□□□ -0.55
SNX1-211ENST00000560829 S100ZQ8WXG8 99 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 BORCS5Q969J3 196 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 MRPL48Q96GC5 212 aaKnown RBP11.6□□□□□ -0.55
SNX1-211ENST00000560829 KCTD7Q96MP8 289 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 MNTQ99583 582 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 TM9SF2Q99805 663 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 MED18Q9BUE0 208 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 IRF2BPLQ9H1B7 796 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 SRA1Q9HD15 236 aaKnown RBP11.6□□□□□ -0.55
SNX1-211ENST00000560829 COPS3Q9UNS2 423 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 POLHQ9Y253 713 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 GSTK1Q9Y2Q3 226 aa11.6□□□□□ -0.55
SNX1-211ENST00000560829 MRPS18BQ9Y676 258 aaKnown RBP11.6□□□□□ -0.55
SNX1-211ENST00000560829 A6NIZ1 184 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 CDRT15L2A8MXV6 281 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 CLDN25C9JDP6 229 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 LRRTM2O43300 516 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 P04436 131 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 HLA-DOBP13765 273 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 ZNF17P17021 662 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 CSRP1P21291 193 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms