RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 CLEC2DQ9UHP7 191 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 CA5BQ9Y2D0 317 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 ANKRD12Q6UB98 2062 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 TMEM218A2RU14 115 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 TMEM89A2RUT3 159 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 TMEM200CA6NKL6 621 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 USP17L23D6RBM5 183 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 J3KR12 359 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 MPZL2O60487 215 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 AQP8O94778 261 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 IGFBP1P08833 259 aaPredicted RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 SAGP10523 405 aaPredicted RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 HTR5AP47898 357 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 POLR2LP62875 67 aaKnown RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 IRF8Q02556 426 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 RBBP4Q09028 425 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 MPPE1Q53F39 396 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 GPRC6AQ5T6X5 926 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 HECTD2Q5U5R9 776 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 MEDAGQ5VYS4 303 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 RNLSQ5VYX0 342 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF660Q6AZW8 331 aaPredicted RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 TMEM207Q6UWW9 146 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 MEPCEQ7L2J0 689 aaKnown RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 FAM122BQ7Z309 247 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 TSPAN33Q86UF1 283 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 BMPERQ8N8U9 685 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 BEST4Q8NFU0 473 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 OR10K1Q8NGX5 313 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 UBA3Q8TBC4 463 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 TCTEX1D2Q8WW35 142 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 SENP5Q96HI0 755 aaPredicted RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 LCORQ96JN0 433 aaPredicted RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 FEVQ99581 238 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 DUSP26Q9BV47 211 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 FNDC11Q9BVV2 318 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 SLC26A1Q9H2B4 701 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 NXF3Q9H4D5 531 aaKnown RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 BPIFA1Q9NP55 256 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 CLN6Q9NWW5 311 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 STEAP1Q9UHE8 339 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 MICAL3Q7RTP6 2002 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 TRBV5-3A0A0A0MS03 114 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 METTL21EPA6NDL7 271 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 C1orf196B1AJZ1 125 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 HAS3O00219 553 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 GALR3O60755 368 aaPredicted RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 LRP3O75074 770 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 FZD7O75084 574 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 KRT33AO76009 404 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 ALPIP09923 528 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 C1QTNF9P0C862 333 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF888P0CJ79 500 aaPredicted RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 TFPIP10646 304 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 CAV3P56539 151 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 SPOCK1Q08629 439 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 C1DQ13901 141 aaKnown RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 TMEM255AQ5JRV8 349 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 MANEAQ5SRI9 462 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 TCEAL6Q6IPX3 200 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 SCIMPQ6UWF3 145 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 LRRN1Q6UXK5 716 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 ALKAL1Q6UXT8 129 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 DEF8Q6ZN54 512 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 PRSS45Q7RTY3 260 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 DCUN1D3Q8IWE4 304 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 PYROXD2Q8N2H3 581 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 PROKR2Q8NFJ6 384 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 HPDLQ96IR7 371 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 CPPED1Q9BRF8 314 aaPredicted RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 C11orf84Q9BUA3 381 aaPredicted RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 UBQLN3Q9H347 655 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 KCNK15Q9H427 330 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 REEP4Q9H6H4 257 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 GEMIN7Q9H840 131 aaKnown RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 FAM120CQ9NX05 1096 aaKnown RBP6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 PIPOXQ9P0Z9 390 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 POFUT2Q9Y2G5 429 aa6.13□□□□□ -1.43
TSPAN3-209ENST00000560715 SMIM35A0A1B0GVV1 85 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 FEZF1A0PJY2 475 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 NEDD8-MDP1E9PL57 170 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 M0R129 80 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 OR1I1O60431 355 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 HPXP02790 462 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 GIPP09681 153 aaPredicted RBP6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 CD1DP15813 335 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 ITGA3P26006 1051 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 GIFP27352 417 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 TIA1P31483 386 aaKnown RBP eCLIP6.12□□□□□ -1.438e-8■■■■□ 22.8
TSPAN3-209ENST00000560715 SLC6A6P31641 620 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 CLRN1P58418 232 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 CDC42P60953 191 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 RAB2AP61019 212 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 SEC61A1P61619 476 aaKnown RBP6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 IL10RBQ08334 325 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 RASGEF1BQ0VAM2 473 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 GANABQ14697 944 aaKnown RBP6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 PAFAH1B3Q15102 231 aaKnown RBP6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 C10orf111Q8N326 155 aa6.12□□□□□ -1.43
TSPAN3-209ENST00000560715 OR56B4Q8NH76 319 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms