RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ABCA1O95477 2261 aa12.27□□□□□ -0.44
TPM1-223ENST00000560445 IGKV1D-42A0A075B6H8 117 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 TRAF3IP2O43734 574 aaPredicted RBP12.27□□□□□ -0.45
TPM1-223ENST00000560445 F12P00748 615 aaPredicted RBP12.27□□□□□ -0.45
TPM1-223ENST00000560445 IGKV3-15P01624 115 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 CD247P20963 164 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 IFNA8P32881 189 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 CAPZA2P47755 286 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 PDLIM4P50479 330 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 CDH12P55289 794 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 RPS23P62266 143 aaKnown RBP12.27□□□□□ -0.45
TPM1-223ENST00000560445 EFNB3Q15768 340 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 ADRM1Q16186 407 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 CEACAM16Q2WEN9 425 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 MMEL1Q495T6 779 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 ERICH5Q6P6B1 374 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 TTC33Q6PID6 262 aaPredicted RBP12.27□□□□□ -0.45
TPM1-223ENST00000560445 DPPA2Q7Z7J5 298 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 TMEM123Q8N131 208 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 PCYOX1LQ8NBM8 494 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 OR8J3Q8NGG0 315 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 OR5J2Q8NH18 312 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 FBXO17Q96EF6 278 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 TNFRSF13CQ96RJ3 184 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 ARHGDIGQ99819 225 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 PIMREGQ9BSJ6 248 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 ULBP2Q9BZM5 246 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 RAB1BQ9H0U4 201 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 IKZF5Q9H5V7 419 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 KAT8Q9H7Z6 458 aaKnown RBP12.27□□□□□ -0.45
TPM1-223ENST00000560445 STX18Q9P2W9 335 aaKnown RBP12.27□□□□□ -0.45
TPM1-223ENST00000560445 AP3M1Q9Y2T2 418 aa12.27□□□□□ -0.45
TPM1-223ENST00000560445 A0A096LPE4 126 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 A0A1W2PPZ6 126 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 TRAPPC13A5PLN9 417 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 A8MV72 311 aaPredicted RBP12.26□□□□□ -0.45
TPM1-223ENST00000560445 M0QX08 132 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 M0R3G1 203 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 TPST1O60507 370 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 SASH3O75995 380 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 CECR9P0C854 216 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 NR2C1P13056 603 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 AHCYP23526 432 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 PPOXP50336 477 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 MTPNP58546 118 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 NPTX1Q15818 432 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 GSG1Q2KHT4 349 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 PTOV1Q86YD1 416 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 C20orf196Q8IYI0 205 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 KDM8Q8N371 416 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 SMYD1Q8NB12 490 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 ECSITQ9BQ95 431 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 ZNF385DQ9H6B1 395 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 NANSQ9NR45 359 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 YAE1D1Q9NRH1 226 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 GID8Q9NWU2 228 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 LPAR3Q9UBY5 353 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 CDC42EP3Q9UKI2 254 aa12.26□□□□□ -0.45
TPM1-223ENST00000560445 CHD3Q12873 2000 aaKnown RBP12.26□□□□□ -0.45
TPM1-223ENST00000560445 LOC390937A0A1W2PQ73 354 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 HTR3EA5X5Y0 456 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 M0R3H8 397 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 PLPP3O14495 311 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 MGRN1O60291 552 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 NDUFS7O75251 213 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 UBL3O95164 117 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 FARS2O95363 451 aaKnown RBP12.25□□□□□ -0.45
TPM1-223ENST00000560445 RAB36O95755 333 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 BGLAPP02818 100 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 OR4A8P0C604 315 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 ADORA3P0DMS8 318 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 NPR2P20594 1047 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 PTNP21246 168 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 USF1P22415 310 aaPredicted RBP12.25□□□□□ -0.45
TPM1-223ENST00000560445 CSNK1A1P48729 337 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 GZMKP49863 264 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 IDH3GP51553 393 aaPredicted RBP12.25□□□□□ -0.45
TPM1-223ENST00000560445 VLDLRP98155 873 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 SWI5Q1ZZU3 235 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 VMACQ2NL98 169 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 GLIPR1L2Q4G1C9 344 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 ENTPD8Q5MY95 495 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 REP15Q6BDI9 236 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 PODNL1Q6PEZ8 512 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 ZNF627Q7L945 461 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 ZNF525Q8N782 197 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 C10orf105Q8TEF2 133 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 NEU4Q8WWR8 484 aaPredicted RBP12.25□□□□□ -0.45
TPM1-223ENST00000560445 PCDHAC1Q9H158 963 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 DYNLRB1Q9NP97 96 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 ZNF229Q9UJW7 825 aa12.25□□□□□ -0.45
TPM1-223ENST00000560445 SONP18583 2426 aaKnown RBP12.25□□□□□ -0.45
TPM1-223ENST00000560445 IGHV4-30-2A0A087WSY4 118 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 SLC35F4A4IF30 521 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 GMNCA6NCL1 334 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 SLC22A2O15244 555 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 THRBP10828 461 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 CR1P17927 2039 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 CBLP22681 906 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 RBM34P42696 430 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms