RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 MARCH5Q9NX47 278 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 MS4A12Q9NXJ0 267 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 NKIRAS1Q9NYS0 192 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 PTTG3PQ9NZH4 202 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 MTCH1Q9NZJ7 389 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CD274Q9NZQ7 290 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 GALPQ9UBC7 116 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 SEC14L3Q9UDX4 400 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 KLK12Q9UKR0 248 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 RBMX2Q9Y388 322 aaKnown RBP2.18□□□□□ -2.06
SPG11-206ENST00000558093 LRRC42Q9Y546 428 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 ANKRD30AQ9BXX3 1397 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 NACAE9PAV3 2078 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 FAM240BA0A1B0GVZ2 78 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 OR6C70A6NIJ9 312 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 PDZK1P1A8MUH7 402 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 H3BTX0 84 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 BCKDKO14874 412 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 COCHO43405 550 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 DUX1O43812 170 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 HCN1O60741 890 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 SCRG1O75711 98 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 CABYRO75952 493 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 NEBLO76041 1014 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 OR4F21O95013 312 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 CAPN1P07384 714 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 OR8U8P0C7N1 319 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 GSTT2P0CG29 244 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 GSTT2BP0CG30 244 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 HSMCR30P0CW71 290 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 PSG2P11465 335 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 HOXB8P17481 243 aaPredicted RBP2.17□□□□□ -2.06
SPG11-206ENST00000558093 TSPAN8P19075 237 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 UQCRC2P22695 453 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 IL32P24001 234 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 IL12BP29460 328 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 ALDH3A1P30838 453 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 HOXA9P31269 272 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 UGT1A5P35504 534 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 GCKP35557 465 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 NAA10P41227 235 aaPredicted RBP2.17□□□□□ -2.06
SPG11-206ENST00000558093 RANBP1P43487 201 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 NAMPTP43490 491 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 RPL29P47914 159 aaKnown RBP2.17□□□□□ -2.06
SPG11-206ENST00000558093 C21orf59P57076 290 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 DAOAP59103 153 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 SEC61GP60059 68 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 RAB11AP62491 216 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 TLE4Q04727 773 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 GLO1Q04760 184 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 PMS2P3Q13401 168 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 ILKQ13418 452 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 USF2Q15853 346 aaPredicted RBP2.17□□□□□ -2.06
SPG11-206ENST00000558093 RAB11BQ15907 218 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 HSDL1Q3SXM5 330 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 XKR4Q5GH76 650 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 PDZK1Q5T2W1 519 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 GPR157Q5UAW9 335 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 RAET1LQ5VY80 246 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 TTC23Q5W5X9 447 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 ZNF470Q6ECI4 717 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 OR8G2PQ6IF36 304 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 Q6P435 159 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 SLC39A4Q6P5W5 647 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 TMEM220Q6QAJ8 160 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 FAM159AQ6UWV7 190 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 PAQR9Q6ZVX9 377 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 Q7L0L9 218 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 BHLHA15Q7RTS1 189 aaPredicted RBP2.17□□□□□ -2.06
SPG11-206ENST00000558093 PAGE2Q7Z2X7 111 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 GCNT2Q8N0V5 402 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 FAM58AQ8N1B3 248 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 CERS5Q8N5B7 392 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 CEP112Q8N8E3 955 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 DCAF4L2Q8NA75 395 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 ZNF680Q8NEM1 530 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 OR7G1Q8NGA0 311 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 OR5D13Q8NGL4 314 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 KCNG3Q8TAE7 436 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 FANK1Q8TC84 345 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 PNPT1Q8TCS8 783 aaKnown RBP2.17□□□□□ -2.06
SPG11-206ENST00000558093 DQX1Q8TE96 717 aaKnown RBP2.17□□□□□ -2.06
SPG11-206ENST00000558093 TRUB1Q8WWH5 349 aaKnown RBP2.17□□□□□ -2.06
SPG11-206ENST00000558093 TESK2Q96S53 571 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 TUBGCP2Q9BSJ2 902 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 CHRDL1Q9BU40 450 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 WRAP53Q9BUR4 548 aaKnown RBP2.17□□□□□ -2.06
SPG11-206ENST00000558093 CHID1Q9BWS9 393 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 TEKT3Q9BXF9 490 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 MRPL13Q9BYD1 178 aaKnown RBP2.17□□□□□ -2.06
SPG11-206ENST00000558093 SLC25A39Q9BZJ4 359 aaPredicted RBP2.17□□□□□ -2.06
SPG11-206ENST00000558093 ROPN1BQ9BZX4 212 aaPredicted RBP2.17□□□□□ -2.06
SPG11-206ENST00000558093 OR2AG1Q9H205 316 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 COG4Q9H9E3 785 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 RAB18Q9NP72 206 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 NT5MQ9NPB1 228 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 C1orf123Q9NWV4 160 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 OR1A1Q9P1Q5 309 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 SPRR3Q9UBC9 169 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 SCML1Q9UN30 329 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms