RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 DBIP07108 87 aaKnown RBP11.26□□□□□ -0.61
LDLR-205ENST00000557933 ANXA2P07355 339 aaKnown RBP11.26□□□□□ -0.61
LDLR-205ENST00000557933 UGT2B7P16662 529 aa11.26□□□□□ -0.61
LDLR-205ENST00000557933 TYRP1P17643 537 aa11.26□□□□□ -0.61
LDLR-205ENST00000557933 SLC6A6P31641 620 aa11.26□□□□□ -0.61
LDLR-205ENST00000557933 CDKN2AP42771 156 aaKnown RBP11.26□□□□□ -0.61
LDLR-205ENST00000557933 TAS2R43P59537 309 aa11.26□□□□□ -0.61
LDLR-205ENST00000557933 CST6Q15828 149 aa11.26□□□□□ -0.61
LDLR-205ENST00000557933 SCGB2B2Q4G0G5 96 aa11.26□□□□□ -0.61
LDLR-205ENST00000557933 GSG1LQ6UXU4 331 aa11.26□□□□□ -0.61
LDLR-205ENST00000557933 PAQR7Q86WK9 346 aa11.26□□□□□ -0.61
LDLR-205ENST00000557933 TTLQ8NG68 377 aa11.26□□□□□ -0.61
LDLR-205ENST00000557933 OR6N2Q8NGY6 317 aa11.26□□□□□ -0.61
LDLR-205ENST00000557933 OPN4Q9UHM6 478 aa11.26□□□□□ -0.61
LDLR-205ENST00000557933 PFDN2Q9UHV9 154 aa11.26□□□□□ -0.61
LDLR-205ENST00000557933 FBXO9Q9UK97 447 aaPredicted RBP11.26□□□□□ -0.61
LDLR-205ENST00000557933 ACSL5Q9ULC5 683 aa11.26□□□□□ -0.61
LDLR-205ENST00000557933 GABARAPH6UMI1 98 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 IFNGP01579 166 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 ZP3P21754 424 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 LGALS3BPQ08380 585 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 ETFDHQ16134 617 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 EIPR1Q53HC9 387 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 TMPRSS11FQ6ZWK6 438 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 ZNF765Q7L2R6 523 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 TOR1AIP2Q8NFQ8 470 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 OR1S1Q8NH92 325 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 MOGAT1Q96PD6 335 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 MFFQ9GZY8 342 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 EXO5Q9H790 373 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 TMEM185BQ9H7F4 350 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 EVA1AQ9H8M9 152 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 EXOSC3Q9NQT5 275 aaKnown RBP11.25□□□□□ -0.61
LDLR-205ENST00000557933 PHPT1Q9NRX4 125 aaPredicted RBP11.25□□□□□ -0.61
LDLR-205ENST00000557933 DZANK1Q9NVP4 752 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 ASXL3Q9C0F0 2248 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 FREM3P0C091 2139 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 A0A0B4J2E0 115 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 A0A1B0GUH1 482 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 A0A1B0GX12 115 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 B3GALT2O43825 422 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 GALR3O60755 368 aaPredicted RBP11.25□□□□□ -0.61
LDLR-205ENST00000557933 WISP1O95388 367 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 LTBQ06643 244 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 DYRK1AQ13627 763 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 TMEM52BQ4KMG9 183 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 LRRN1Q6UXK5 716 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 MDGA2Q7Z553 956 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 ZNF676Q8N7Q3 588 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 MFSD9Q8NBP5 474 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 OR9A4Q8NGU2 314 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 ZNF524Q96C55 264 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 ADAD1Q96M93 576 aaKnown RBP11.25□□□□□ -0.61
LDLR-205ENST00000557933 ALG12Q9BV10 488 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 FRRS1LQ9P0K9 344 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 CPNE7Q9UBL6 633 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 TRAV1-2A0A0B4J238 106 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 C11orf98E9PRG8 122 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 HLA-DQA2P01906 255 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 IFNGR1P15260 489 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 IGFALSP35858 605 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 HSD17B2P37059 387 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 LSSP48449 732 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 ART1P52961 327 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 GPM6BQ13491 265 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 PDGFRLQ15198 375 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 ZNF626Q68DY1 528 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 ZNF660Q6AZW8 331 aaPredicted RBP11.25□□□□□ -0.61
LDLR-205ENST00000557933 FAM122CQ6P4D5 195 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 FAM3CQ92520 227 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 MOAP1Q96BY2 351 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 ACTR6Q9GZN1 396 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 ZCCHC4Q9H5U6 513 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 CHRNA9Q9UGM1 479 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 MSRAQ9UJ68 235 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 SLC22A13Q9Y226 551 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 YBX2Q9Y2T7 364 aaKnown RBP11.25□□□□□ -0.61
LDLR-205ENST00000557933 NPTNQ9Y639 398 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 SESN1Q9Y6P5 492 aa11.25□□□□□ -0.61
LDLR-205ENST00000557933 KIF26BQ2KJY2 2108 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 DENND4AQ7Z401 1863 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 ANKRD20A5PA0PJZ0 165 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 OGG1O15527 345 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 SDC3O75056 442 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 TGM6O95932 706 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 SERPINA3P01011 423 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 CA3P07451 260 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 TLX1P31314 330 aaPredicted RBP11.24□□□□□ -0.61
LDLR-205ENST00000557933 CCKBRP32239 447 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 ACAA2P42765 397 aaKnown RBP11.24□□□□□ -0.61
LDLR-205ENST00000557933 LUMP51884 338 aaPredicted RBP11.24□□□□□ -0.61
LDLR-205ENST00000557933 AKIRIN2Q53H80 203 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 ZNF425Q6IV72 752 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 ARHGAP11AQ6P4F7 1023 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 ZNF627Q7L945 461 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 RTN4RL2Q86UN3 420 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 NPEPL1Q8NDH3 523 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 OR4S1Q8NGB4 309 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 SHARPINQ9H0F6 387 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 TMEM231Q9H6L2 316 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms