RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 ZNF431Q8TF32 576 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SETD7Q8WTS6 366 aaKnown RBP4.27□□□□□ -1.73
ATXN3-246ENST00000557030 OMA1Q96E52 524 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 OTUB1Q96FW1 271 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-246ENST00000557030 LRR1Q96L50 414 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 GPR137Q96N19 417 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 OR2M2Q96R28 347 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 PKP4Q99569 1192 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 ATF6BQ99941 703 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 BEX2Q9BXY8 128 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 DPAGT1Q9H3H5 408 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 ANKRD19PQ9H560 264 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SLC28A3Q9HAS3 691 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 MIEF1Q9NQG6 463 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 ZNF275Q9NSD4 429 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-246ENST00000557030 MCUBQ9NWR8 336 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SPG21Q9NZD8 308 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 IL36RNQ9UBH0 155 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 COMMD3Q9UBI1 195 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 P2RX2Q9UBL9 471 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 EIF3KQ9UBQ5 218 aaKnown RBP4.27□□□□□ -1.73
ATXN3-246ENST00000557030 HSPB7Q9UBY9 170 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SEC14L3Q9UDX4 400 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 ELF5Q9UKW6 265 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-246ENST00000557030 PRELID1Q9Y255 219 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 NUBP2Q9Y5Y2 271 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 AUP1Q9Y679 476 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 CDH10Q9Y6N8 788 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 PIAS3Q9Y6X2 628 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SCN8AQ9UQD0 1980 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 ALPK3Q96L96 1907 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 BAHCC1Q9P281 2608 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 CDH23Q9H251 3354 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 ZFC3H1O60293 1989 aaKnown RBP4.26□□□□□ -1.73
ATXN3-246ENST00000557030 TEX13CA0A0J9YWL9 993 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 A0A0X1KG70 313 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 SLC5A10A0PJK1 596 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 C7orf66A4D0T2 115 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 OR5K3A6NET4 321 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 PRSS44E7EML9 344 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 WWP2O00308 870 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 FFAR1O14842 300 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 LDLRAD4O15165 306 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 PI15O43692 258 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 HPGDSO60760 199 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 PTP4A3O75365 173 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 OR7A10O76100 309 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 SOX30O94993 753 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 SOX14O95416 240 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 ETHE1O95571 254 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 SLC16A8O95907 504 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 C1QCP02747 245 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 RAF1P04049 648 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 HMGN1P05114 100 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 CLEC3BP05452 202 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 BCHEP06276 602 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 FHP07954 510 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 IL3P08700 152 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 TNNI3P19429 210 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 EDN2P20800 178 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 GABRR2P28476 465 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 IMPA1P29218 277 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 SLC6A1P30531 599 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 ACSL1P33121 698 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 CA8P35219 290 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 SLC1A3P43003 542 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 BDKRB1P46663 353 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 RFX3P48380 749 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 AMTP48728 403 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 PRLHRP49683 370 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 PDLIM4P50479 330 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 LIM2P55344 173 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 TAS2R43P59537 309 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 RAB14P61106 215 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 TBPL1P62380 186 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 TRA2BP62995 288 aaKnown RBP4.26□□□□□ -1.73
ATXN3-246ENST00000557030 PITPNAQ00169 270 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 HOXC5Q00444 222 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 RGS1Q08116 209 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 FAM27E3Q08E93 113 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 TSPAN31Q12999 210 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 SHBQ15464 509 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 CLLU1Q5K131 121 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 SPOUT1Q5T280 376 aaKnown RBP4.26□□□□□ -1.73
ATXN3-246ENST00000557030 PRAMEF8Q5VWM4 474 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 PRAMEF7Q5VXH5 474 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 LAMTOR1Q6IAA8 161 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 TYW3Q6IPR3 259 aaKnown RBP4.26□□□□□ -1.73
ATXN3-246ENST00000557030 ANKRD54Q6NXT1 300 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 C1orf94Q6P1W5 598 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 BHLHB9Q6PI77 547 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 TEX261Q6UWH6 196 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 PAMR1Q6UXH9 720 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 RFLNAQ6ZTI6 216 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 RASSF6Q6ZTQ3 369 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 UTS2BQ765I0 119 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 TMPRSS11BQ86T26 416 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 ASPGQ86U10 573 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 TPRA1Q86W33 373 aa4.26□□□□□ -1.73
ATXN3-246ENST00000557030 AMIGO1Q86WK6 493 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms