RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 A0A087WZY1 265 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 ANKRD33BA6NCL7 494 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 CLDN25C9JDP6 229 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 C11orf98E9PRG8 122 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 EFNA2O43921 213 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 HLA-DPB1P04440 258 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 SERPINA7P05543 415 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 CELP19835 753 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 EIF1P41567 113 aaKnown RBP13.26□□□□□ -0.29
VPS33B-205ENST00000556096 HSF2Q03933 536 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 Q0VFX4 171 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 ZNF846Q147U1 533 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 SLC22A10Q63ZE4 541 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 SLC6A19Q695T7 634 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 PLCZ1Q86YW0 608 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 SLC35F2Q8IXU6 374 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 SYS1Q8N2H4 156 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 TMEM156Q8N614 296 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 OR2T4Q8NH00 348 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 ZNF417Q8TAU3 575 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 ZNF519Q8TB69 540 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 TMEM203Q969S6 136 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 MRPL48Q96GC5 212 aaKnown RBP13.26□□□□□ -0.29
VPS33B-205ENST00000556096 ARL5BQ96KC2 179 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 SGCZQ96LD1 299 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 ZNF587Q96SQ5 575 aaPredicted RBP13.26□□□□□ -0.29
VPS33B-205ENST00000556096 WDR12Q9GZL7 423 aaKnown RBP13.26□□□□□ -0.29
VPS33B-205ENST00000556096 HPF1Q9NWY4 346 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 P4HTMQ9NXG6 502 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 FBXL2Q9UKC9 423 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 GSTK1Q9Y2Q3 226 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 NCOR2Q9Y618 2525 aa13.26□□□□□ -0.29
VPS33B-205ENST00000556096 PNMA8CA0A1B0GUJ8 204 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 TRABD2BA6NFA1 517 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 TRIM3O75382 744 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-205ENST00000556096 SERPINI2O75830 405 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 IL1AP01583 271 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 ACTA2P62736 377 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 ACTG2P63267 376 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 FABP5Q01469 135 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 CAMK2BQ13554 666 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 INPP5JQ15735 1006 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-205ENST00000556096 ACKR1Q16570 336 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 CRTC2Q53ET0 693 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-205ENST00000556096 H1FNTQ75WM6 255 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-205ENST00000556096 VASH1Q7L8A9 365 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-205ENST00000556096 EGFL6Q8IUX8 553 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 GHDCQ8N2G8 530 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 ZFP41Q8N8Y5 198 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 ZNF248Q8NDW4 579 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 DNAJA3Q96EY1 480 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 MED18Q9BUE0 208 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 PROK2Q9HC23 129 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 PALMDQ9NP74 551 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 FANCFQ9NPI8 374 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 ZMIZ1Q9ULJ6 1067 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 CACNA1AO00555 2505 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 NPIPB13A6NJU9 1138 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 LIPT2A6NK58 231 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 NPIPB4C9JG80 1138 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 MS4A18H0YCH9 400 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 J3QLW9 94 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 XKRYO14609 159 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 PLPP2O43688 288 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 CCL3P10147 92 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 IMPDH2P12268 514 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 ZNF19P17023 458 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 AHCYP23526 432 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 DLSTP36957 453 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 RPS19P39019 145 aaKnown RBP13.25□□□□□ -0.29
VPS33B-205ENST00000556096 OR7A5Q15622 319 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 MS4A18Q3C1V0 323 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 CDONQ4KMG0 1287 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 PRAMEF20Q5VT98 475 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 EEF1A1P5Q5VTE0 462 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 VASNQ6EMK4 673 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 C3orf33Q6P1S2 294 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 SLC16A9Q7RTY1 509 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 OR6K6Q8NGW6 343 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 ZBTB8AQ96BR9 441 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 NXPE2Q96DL1 559 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 C4orf36Q96KX1 117 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 KCTD7Q96MP8 289 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 TM9SF2Q99805 663 aa13.25□□□□□ -0.29
VPS33B-205ENST00000556096 CPAMD8Q8IZJ3 1885 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 A0A075B6Q4 140 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 A0A1W2PRG6 482 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 SHISA8B8ZZ34 492 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 SNPHO15079 494 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 ARHGEF9O43307 516 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 RAD1O60671 282 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 SNX4O95219 450 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 TFPIP10646 304 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 F8A1P23610 371 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 GTF2E2P29084 291 aaKnown RBP13.24□□□□□ -0.29
VPS33B-205ENST00000556096 PYCR1P32322 319 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 ACVR1BP36896 505 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 NAA10P41227 235 aaPredicted RBP13.24□□□□□ -0.29
VPS33B-205ENST00000556096 OR12D2P58182 307 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 PUDPQ08623 228 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms