RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 LNX2Q8N448 690 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 IQCF1Q8N6M8 205 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 OR9K2Q8NGE7 335 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 OR8J1Q8NGP2 316 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 OR5M9Q8NGP3 310 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 MOSPD2Q8NHP6 518 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 TRUB1Q8WWH5 349 aaKnown RBP10.01□□□□□ -0.81
SHMT2-220ENST00000555634 CNBD2Q96M20 576 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 GPA33Q99795 319 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 TUBA1CQ9BQE3 449 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 ANKRD60Q9BZ19 345 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 PLA2G12AQ9BZM1 189 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 CALHM2Q9HA72 323 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 FANCFQ9NPI8 374 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 NRIP3Q9NQ35 241 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 CLN6Q9NWW5 311 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 ASB6Q9NWX5 421 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 TVP23BQ9NYZ1 205 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 KLHL13Q9P2N7 655 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 TNFRSF10DQ9UBN6 386 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 RCE1Q9Y256 329 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 LRCH1Q9Y2L9 728 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 NOSIPQ9Y314 301 aaKnown RBP10.01□□□□□ -0.81
SHMT2-220ENST00000555634 IER3IP1Q9Y5U9 82 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 MED12Q93074 2177 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 TLN1Q9Y490 2541 aaKnown RBP10□□□□□ -0.81
SHMT2-220ENST00000555634 DOCK7Q96N67 2140 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 TEX13CA0A0J9YWL9 993 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 CENPBD1B2RD01 187 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 PRR23D1E9PI22 279 aaPredicted RBP10□□□□□ -0.81
SHMT2-220ENST00000555634 H0YC42 278 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 BHLHE40O14503 412 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 AHCYL1O43865 530 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 SLC43A1O75387 559 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 WISP1O95388 367 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 PRR23D2P0DMB1 279 aaPredicted RBP10□□□□□ -0.81
SHMT2-220ENST00000555634 IFNGR1P15260 489 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 ACVR1BP36896 505 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 GUCA1AP43080 201 aaPredicted RBP10□□□□□ -0.81
SHMT2-220ENST00000555634 BIDP55957 195 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 ERVK-25P63136 954 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 H3F3AP84243 136 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 CDK5Q00535 292 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 LTBQ06643 244 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 KHDRBS1Q07666 443 aaKnown RBP eCLIP10□□□□□ -0.81
SHMT2-220ENST00000555634 CD47Q08722 323 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 PDK3Q15120 406 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 ACKR1Q16570 336 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 ACSF3Q4G176 576 aaPredicted RBP10□□□□□ -0.81
SHMT2-220ENST00000555634 LCN1P1Q5VSP4 162 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 ZNF691Q5VV52 312 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 ANKRD34AQ69YU3 496 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 C12orf73Q69YU5 71 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 B3GNT6Q6ZMB0 384 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 ABHD12BQ7Z5M8 362 aaPredicted RBP10□□□□□ -0.81
SHMT2-220ENST00000555634 ATCAYQ86WG3 371 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 ST6GALNAC3Q8NDV1 305 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 OR8D4Q8NGM9 314 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 FNDC9Q8TBE3 224 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 ROBO4Q8WZ75 1007 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 TFAP2CQ92754 450 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 WNT2BQ93097 391 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 ZNF566Q969W8 418 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 GMPPAQ96IJ6 420 aaPredicted RBP10□□□□□ -0.81
SHMT2-220ENST00000555634 ZNF845Q96IR2 970 aaPredicted RBP10□□□□□ -0.81
SHMT2-220ENST00000555634 UCN2Q96RP3 112 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 FN3KQ9H479 309 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 CMC2Q9NRP2 79 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 PNPLA3Q9NST1 481 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 TAS2R5Q9NYW4 299 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 SEC14L4Q9UDX3 406 aa10□□□□□ -0.81
SHMT2-220ENST00000555634 NDRG4Q9ULP0 352 aaKnown RBP10□□□□□ -0.81
SHMT2-220ENST00000555634 FLNBO75369 2602 aaKnown RBP10□□□□□ -0.81
SHMT2-220ENST00000555634 IRGMA1A4Y4 181 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 CD8B2A6NJW9 211 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 ZNF724A8MTY0 619 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 SURF4O15260 269 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 ARHGEF9O43307 516 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 PTP4A3O75365 173 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 MRPL33O75394 65 aaKnown RBP9.99□□□□□ -0.81
SHMT2-220ENST00000555634 TXNDC12O95881 172 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 IL2RAP01589 272 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 TSPAN19P0C672 248 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 CRABP1P29762 137 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 BLVRAP53004 296 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 SLC16A1P53985 500 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 CLDN17P56750 224 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 RPS7P62081 194 aaKnown RBP9.99□□□□□ -0.81
SHMT2-220ENST00000555634 ADARB1P78563 741 aaKnown RBP9.99□□□□□ -0.81
SHMT2-220ENST00000555634 TEKQ02763 1124 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 MELKQ14680 651 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 SLC17A1Q14916 467 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 PRR30Q53SZ7 412 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-220ENST00000555634 SLC35F1Q5T1Q4 408 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 TMEM236Q5W0B7 351 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 NSUN5P2Q63ZY6 315 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 LEG1Q6P5S2 330 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 THSD4Q6ZMP0 1018 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 AAED1Q7RTV5 226 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 THAP5Q7Z6K1 395 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms