RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ARF4P18085 180 aaPredicted RBP1.43□□□□□ -2.18
SNX6-204ENST00000555541 CYP2F1P24903 491 aa1.43□□□□□ -2.18
SNX6-204ENST00000555541 ZNF816Q0VGE8 651 aaPredicted RBP1.43□□□□□ -2.18
SNX6-204ENST00000555541 PDIA2Q13087 525 aaKnown RBP1.43□□□□□ -2.18
SNX6-204ENST00000555541 SLC39A6Q13433 755 aa1.43□□□□□ -2.18
SNX6-204ENST00000555541 ZBED5Q49AG3 693 aa1.43□□□□□ -2.18
SNX6-204ENST00000555541 RAB12Q6IQ22 244 aa1.43□□□□□ -2.18
SNX6-204ENST00000555541 NTM-AS1Q6ZSK4 140 aa1.43□□□□□ -2.18
SNX6-204ENST00000555541 BIVMQ86UB2 503 aa1.43□□□□□ -2.18
SNX6-204ENST00000555541 ZADH2Q8N4Q0 377 aa1.43□□□□□ -2.18
SNX6-204ENST00000555541 GATSQ8NAP1 163 aa1.43□□□□□ -2.18
SNX6-204ENST00000555541 MGARPQ8TDB4 240 aa1.43□□□□□ -2.18
SNX6-204ENST00000555541 TUBGCP2Q9BSJ2 902 aa1.43□□□□□ -2.18
SNX6-204ENST00000555541 THUMPD1Q9NXG2 353 aaKnown RBP1.43□□□□□ -2.18
SNX6-204ENST00000555541 MMACHCQ9Y4U1 282 aa1.43□□□□□ -2.18
SNX6-204ENST00000555541 NLRC5Q86WI3 1866 aa1.43□□□□□ -2.18
SNX6-204ENST00000555541 WDR62O43379 1518 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 IGHV5-10-1A0A0J9YXX1 117 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 LRP5LA4QPB2 252 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 F5H6K3 240 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 K7EM74 188 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 ZNF207O43670 478 aaKnown RBP1.42□□□□□ -2.18
SNX6-204ENST00000555541 SCGB2A1O75556 95 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 CCNKO75909 580 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 CDRT1O95170 752 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 BAG2O95816 211 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 IGHV1-8P0DP01 117 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 IMPDH1P20839 514 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 IL10P22301 178 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 KIR3DL2P43630 455 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 GSSP48637 474 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 NCBP2P52298 156 aaKnown RBP eCLIP1.42□□□□□ -2.18
SNX6-204ENST00000555541 SLC7A9P82251 487 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 KLRC3Q07444 240 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 SRSF5Q13243 272 aaKnown RBP1.42□□□□□ -2.18
SNX6-204ENST00000555541 OXA1LQ15070 435 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 TMEM41BQ5BJD5 291 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 BEND3Q5T5X7 828 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 OR1F12Q8NHA8 337 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 C4orf36Q96KX1 117 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 AMDHD1Q96NU7 426 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 TSSK3Q96PN8 268 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 RNF157Q96PX1 679 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 RNF2Q99496 336 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 RAB34Q9BZG1 259 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 C12orf10Q9HB07 376 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 MUC6Q6W4X9 2439 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 NID2Q14112 1375 aa1.42□□□□□ -2.18
SNX6-204ENST00000555541 PTPRTO14522 1441 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 TMEM223A0PJW6 202 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 TRIM64A6NGJ6 449 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 TRIM64BA6NI03 449 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 BTN3A3O00478 584 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 SEC22BO75396 215 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 TM7SF2O76062 418 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 AP2A1O95782 977 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 GCAP28676 217 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 IL12AP29459 219 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 CAMLGP49069 296 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 GMFBP60983 142 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 LOXL1Q08397 574 aaPredicted RBP1.41□□□□□ -2.18
SNX6-204ENST00000555541 HES5Q5TA89 166 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 KCNIP4Q6PIL6 250 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 LINC00173Q6ZV60 143 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 SLC35F2Q8IXU6 374 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 STPG2Q8N412 459 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 NECAP1Q8NC96 275 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 CNNM3Q8NE01 707 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 RNF139Q8WU17 664 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 EFHD2Q96C19 240 aaPredicted RBP1.41□□□□□ -2.18
SNX6-204ENST00000555541 RBMXL1Q96E39 390 aaKnown RBP1.41□□□□□ -2.18
SNX6-204ENST00000555541 PELI1Q96FA3 418 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 OXGR1Q96P68 337 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 GBA3Q9H227 469 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 GIN1Q9NXP7 522 aa1.41□□□□□ -2.18
SNX6-204ENST00000555541 GPATCH8Q9UKJ3 1502 aaKnown RBP1.4□□□□□ -2.18
SNX6-204ENST00000555541 CCDC182A6NF36 153 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 ZNF850A8MQ14 1090 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 RAD51BO15315 384 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 SOX6P35712 828 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 CYB561P49447 251 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 CASP4P49662 377 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 CDC20Q12834 499 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 ERCC8Q13216 396 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 IRF4Q15306 451 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 TAF9Q16594 264 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 SPIN3Q5JUX0 258 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 C1orf220Q5T0J3 134 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 DUX4L9Q6RFH8 374 aaPredicted RBP1.4□□□□□ -2.19
SNX6-204ENST00000555541 STRADAQ7RTN6 431 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 ZNF573Q86YE8 665 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 CCDC65Q8IXS2 484 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 CENPLQ8N0S6 344 aaPredicted RBP1.4□□□□□ -2.19
SNX6-204ENST00000555541 LGI3Q8N145 548 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 ACOT4Q8N9L9 421 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 FNDC5Q8NAU1 212 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 NEURL3Q96EH8 262 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 L3HYPDHQ96EM0 354 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 DOK1Q99704 481 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 GPA33Q99795 319 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms