RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 F13BP05160 661 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 HLA-DOBP13765 273 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 NTF4P34130 210 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 UGT2B10P36537 528 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 RPL4P36578 427 aaKnown RBP12.24□□□□□ -0.45
TUBB3-202ENST00000553656 KIR2DL3P43628 341 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 LIMS1P48059 325 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 ARHGDIAP52565 204 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 BIDP55957 195 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 RPS4XP62701 263 aaKnown RBP12.24□□□□□ -0.45
TUBB3-202ENST00000553656 FAPQ12884 760 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 ITGADQ13349 1161 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 KPNB1Q14974 876 aaKnown RBP12.24□□□□□ -0.45
TUBB3-202ENST00000553656 TSPO2Q5TGU0 170 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 CARD17Q5XLA6 110 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 CXorf67Q86X51 503 aaPredicted RBP12.24□□□□□ -0.45
TUBB3-202ENST00000553656 GABRG1Q8N1C3 465 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 GPR137CQ8N3F9 429 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 STEAP2Q8NFT2 490 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 OR4C15Q8NGM1 316 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 MOSPD2Q8NHP6 518 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 KISS1RQ969F8 398 aaPredicted RBP12.24□□□□□ -0.45
TUBB3-202ENST00000553656 SLCO4A1Q96BD0 722 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 ADAD1Q96M93 576 aaKnown RBP12.24□□□□□ -0.45
TUBB3-202ENST00000553656 SPOCK3Q9BQ16 436 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 EMC6Q9BV81 110 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 MCCC2Q9HCC0 563 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 B3GAT2Q9NPZ5 323 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 STX18Q9P2W9 335 aaKnown RBP12.24□□□□□ -0.45
TUBB3-202ENST00000553656 MALT1Q9UDY8 824 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 GPR52Q9Y2T5 361 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 AP4S1Q9Y587 144 aa12.24□□□□□ -0.45
TUBB3-202ENST00000553656 CIB4A0PJX0 185 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 SLC35F4A4IF30 521 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 ZNF587BE7ETH6 402 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 CDC42EP2O14613 210 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 HNRNPRO43390 633 aaKnown RBP12.23□□□□□ -0.45
TUBB3-202ENST00000553656 TIPRLO75663 272 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 NDUFB2O95178 105 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 PSMB1P20618 241 aaKnown RBP12.23□□□□□ -0.45
TUBB3-202ENST00000553656 FPR3P25089 353 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 EDNRAP25101 427 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 FASP25445 335 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 DNAJA1P31689 397 aaKnown RBP12.23□□□□□ -0.45
TUBB3-202ENST00000553656 CTXN1P60606 82 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 ACTR3P61158 418 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 TGFBR3Q03167 851 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 PPP1R8Q12972 351 aaKnown RBP12.23□□□□□ -0.45
TUBB3-202ENST00000553656 TOP3AQ13472 1001 aaPredicted RBP12.23□□□□□ -0.45
TUBB3-202ENST00000553656 LAPTM4AQ15012 233 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 MICAQ29983 383 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 SFRP5Q5T4F7 317 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 HMBOX1Q6NT76 420 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 C1orf94Q6P1W5 598 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 PGBD2Q6P3X8 592 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 STAC2Q6ZMT1 411 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 ZER1Q7Z7L7 766 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 DMRTC2Q8IXT2 367 aaPredicted RBP12.23□□□□□ -0.45
TUBB3-202ENST00000553656 AQP11Q8NBQ7 271 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 OR10G2Q8NGC3 310 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 OR9Q2Q8NGE9 314 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 OR6N1Q8NGY5 312 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 OR6X1Q8NH79 312 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 FANK1Q8TC84 345 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 TXNDC15Q96J42 360 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 ALKBH3Q96Q83 286 aaPredicted RBP12.23□□□□□ -0.45
TUBB3-202ENST00000553656 OR2M2Q96R28 347 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 TNFRSF13CQ96RJ3 184 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 USB1Q9BQ65 265 aaKnown RBP12.23□□□□□ -0.45
TUBB3-202ENST00000553656 POLDIP3Q9BY77 421 aaKnown RBP12.23□□□□□ -0.45
TUBB3-202ENST00000553656 LINC00470Q9BZP3 86 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 ENKD1Q9H0I2 346 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 SLC7A10Q9NS82 523 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 ARMC1Q9NVT9 282 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 VNN3Q9NY84 501 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 TAS2R16Q9NYV7 291 aa12.23□□□□□ -0.45
TUBB3-202ENST00000553656 HCFC1P51610 2035 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 LYZL6O75951 148 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 ZNF432O94892 652 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 IGHG1P01857 330 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 TSPAN19P0C672 248 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 PPP3CBP16298 524 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 IGFBP2P18065 325 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 IGHV1-2P23083 117 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 COL8A1P27658 744 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 MPGP29372 298 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 CSNK1A1P48729 337 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 CLRN1P58418 232 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 TSPAN31Q12999 210 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 CAMK2DQ13557 499 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 SNTB1Q13884 538 aaKnown RBP12.22□□□□□ -0.45
TUBB3-202ENST00000553656 MELKQ14680 651 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 ACKR1Q16570 336 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 FAM205BPQ63HN1 556 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 ZFP1Q6P2D0 407 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 BHLHA15Q7RTS1 189 aaPredicted RBP12.22□□□□□ -0.45
TUBB3-202ENST00000553656 IGFN1Q86VF2 1251 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 GIPC3Q8TF64 312 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 ZNF566Q969W8 418 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 DUS3LQ96G46 650 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms