RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	PLG	P00747	810 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	SCG5	P05408	212 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	SBK2	P0C263	348 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	WT1	P19544	449 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	SDHB	P21912	280 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	SFTPD	P35247	375 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	RGS6	P49758	472 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	DAP3	P51398	398 aa	Known RBP	11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	B3GALT5-AS1	P59052	145 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	RAP1B	P61224	184 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	RAP1A	P62834	184 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	RAC1	P63000	192 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	ACTC1	P68032	377 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	ACTA1	P68133	377 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	SLC35A1	P78382	337 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	FOXO1	Q12778	655 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	MLLT11	Q13015	90 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	TOMM20	Q15388	145 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	TST	Q16762	297 aa	Known RBP	11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	FAM205BP	Q63HN1	556 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	B3GLCT	Q6Y288	498 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	TMPPE	Q6ZT21	453 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	ERI1	Q8IV48	349 aa	Known RBP	11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	GHDC	Q8N2G8	530 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	ACBD7	Q8N6N7	88 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	MDS2	Q8NDY4	140 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	OR52N1	Q8NH53	320 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	OR14L1P	Q8NHC6	308 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	KCNE4	Q8WWG9	221 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	SMPDL3B	Q92485	455 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	MIB2	Q96AX9	1013 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	ZMYND19	Q96E35	227 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	CNN2	Q99439	309 aa	Known RBP	11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	ZNF649	Q9BS31	505 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	RPRD1B	Q9NQG5	326 aa	Known RBP	11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	PLA2G3	Q9NZ20	509 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	VSX1	Q9NZR4	365 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	MPDZ	O75970	2070 aa		11.4	□□□□□ -0.58
CACNB3-223	ENST00000552480	DAPL1	A0PJW8	107 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	DCDC2B	A2VCK2	349 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480		A6NL46	340 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	NPIPA5	E9PKD4	350 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	SULT2B1	O00204	365 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	CCRL2	O00421	344 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	SEC14L5	O43304	696 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	ARHGEF9	O43307	516 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	NME2P1	O60361	137 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	ATE1	O95260	518 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	OPN1LW	P04000	364 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	MRPL3	P09001	348 aa	Known RBP	11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	RFPL3S	P0C7P2	107 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	NME2	P22392	152 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	GDF1	P27539	372 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	P2RY4	P51582	365 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	HSF1	Q00613	529 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	C19orf57	Q0VDD7	668 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	DOC2B	Q14184	412 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	CTF1	Q16619	201 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	PXK	Q7Z7A4	578 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	LHFPL3	Q86UP9	236 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	SULF2	Q8IWU5	870 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	ZNF485	Q8NCK3	441 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	FAM83F	Q8NEG4	500 aa	Predicted RBP	11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	OR10H4	Q8NGA5	316 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	OR2T4	Q8NH00	348 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	ASB10	Q8WXI3	467 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	TSC22D3	Q99576	134 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	ZNF552	Q9H707	407 aa	Predicted RBP	11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	B4GALT7	Q9UBV7	327 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	KLK13	Q9UKR3	277 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	NPIPA1	Q9UND3	350 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	CAB39	Q9Y376	341 aa	Predicted RBP	11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	PCDHGB7	Q9Y5F8	929 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	MUC6	Q6W4X9	2439 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	EML6	Q6ZMW3	1958 aa		11.39	□□□□□ -0.59
CACNB3-223	ENST00000552480	PRSS37	A4D1T9	235 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	AQP7P3	A6NL99	342 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480		H7C1C5	153 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	SLC22A1	O15245	554 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	SP1	P08047	785 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	HLA-DOB	P13765	273 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	CD46	P15529	392 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	GADD45A	P24522	165 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	PYCR1	P32322	319 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	SH3BGR	P55822	239 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	LCN6	P62502	163 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	CSNK2A1	P68400	391 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	POU3F1	Q03052	451 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	ACSM1	Q08AH1	577 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	DBP	Q10586	325 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	GALE	Q14376	348 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	MELK	Q14680	651 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	LINC01590	Q5TEZ4	76 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	OR2G6	Q5TZ20	316 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	EEF1A1P5	Q5VTE0	462 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	SLC25A25	Q6KCM7	469 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	C19orf48	Q6RUI8	117 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	TMPRSS11A	Q6ZMR5	421 aa		11.38	□□□□□ -0.59
CACNB3-223	ENST00000552480	SLC35D2	Q76EJ3	337 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms