RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 TMEM255BQ8WV15 326 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 HGDQ93099 445 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 NEIL2Q969S2 332 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 CAPNS2Q96L46 248 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 ZNF778Q96MU6 729 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 OR4F4Q96R69 305 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 CPXM1Q96SM3 734 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 ELOVL4Q9GZR5 314 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 MAP6D1Q9H9H5 199 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 C12orf10Q9HB07 376 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 BEX1Q9HBH7 125 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 NRN1Q9NPD7 142 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 FZD3Q9NPG1 666 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 UVRAGQ9P2Y5 699 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 PPP1R3CQ9UQK1 317 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 EXOSC1Q9Y3B2 195 aaKnown RBP3.62□□□□□ -1.83
USP44-208ENST00000552440 DCTN6O00399 190 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 ITM2AO43736 263 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 TFAP2AP05549 437 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 HBQ1P09105 142 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 ABOP16442 354 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 ATF6P18850 670 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 FASP25445 335 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 RPL3P39023 403 aaKnown RBP3.61□□□□□ -1.83
USP44-208ENST00000552440 OR1D5P58170 312 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 C2orf54Q08AI8 447 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 ITPK1Q13572 414 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 ZNHIT3Q15649 155 aaPredicted RBP3.61□□□□□ -1.83
USP44-208ENST00000552440 AKIRIN2Q53H80 203 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 WASHC2DQ5SRD0 308 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 COX15Q7KZN9 410 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 HIPK1Q86Z02 1210 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 APOBEC3FQ8IUX4 373 aaKnown RBP3.61□□□□□ -1.83
USP44-208ENST00000552440 ENTHD1Q8IYW4 607 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 ZFP82Q8N141 532 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 Q8N402 240 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 CCDC71LQ8N9Z2 235 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 OR7A2PQ8NGA2 310 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 OR2Y1Q8NGV0 311 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 OR6K2Q8NGY2 324 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 AENQ8WTP8 325 aaKnown RBP3.61□□□□□ -1.83
USP44-208ENST00000552440 RORBQ92753 470 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 ABTB1Q969K4 478 aaPredicted RBP3.61□□□□□ -1.83
USP44-208ENST00000552440 TMEM143Q96AN5 459 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 CMTM5Q96DZ9 223 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 ZBED6CLQ96FA7 236 aaPredicted RBP3.61□□□□□ -1.83
USP44-208ENST00000552440 ITCHQ96J02 903 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 KLHDC3Q9BQ90 382 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 RAB34Q9BZG1 259 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 ZYG11BQ9C0D3 744 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 CHRNA10Q9GZZ6 450 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 RETNQ9HD89 108 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 FGF20Q9NP95 211 aaPredicted RBP3.61□□□□□ -1.83
USP44-208ENST00000552440 B4GALT7Q9UBV7 327 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 FBXL3Q9UKT7 428 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.61□□□□□ -1.83
USP44-208ENST00000552440 SPATA2Q9UM82 520 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 MRPS18BQ9Y676 258 aaKnown RBP3.61□□□□□ -1.83
USP44-208ENST00000552440 ANKRD30BQ9BXX2 1392 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 UHRF1BP1Q6BDS2 1440 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 NCOA3Q9Y6Q9 1424 aa3.61□□□□□ -1.83
USP44-208ENST00000552440 K7EN84 100 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 hCG_2039718K7EN88 272 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 PDHXO00330 501 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 TM9SF1O15321 606 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 SLC16A4O15374 487 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 GJB5O95377 273 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 SNRPAP09012 282 aaKnown RBP3.6□□□□□ -1.83
USP44-208ENST00000552440 FGF2P09038 288 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 CALM1P0DP23 149 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 CALM2P0DP24 149 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 CALM3P0DP25 149 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 BCKDHAP12694 445 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 GM2AP17900 193 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 DTYMKP23919 212 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 OR1E1P30953 314 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 DNA2P51530 1060 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 XGP55808 180 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 BACE1P56817 501 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 RPL27P61353 136 aaKnown RBP3.6□□□□□ -1.83
USP44-208ENST00000552440 MYL7Q01449 175 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 RIPPLY1Q0D2K3 151 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 ST3GAL3Q11203 375 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 RAB40BQ12829 278 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 DPYSL3Q14195 570 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 MAD2L1BPQ15013 274 aaPredicted RBP3.6□□□□□ -1.83
USP44-208ENST00000552440 HLFQ16534 295 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 ATP6V1FQ16864 119 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 PRTGQ2VWP7 1150 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 TMEM35AQ53FP2 167 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 CYBRD1Q53TN4 286 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 TIMM23BQ5SRD1 257 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 OR2G6Q5TZ20 316 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 SDHAF4Q5VUM1 108 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 ATRAIDQ6UW56 229 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 ZNF547Q8IVP9 402 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 TMEM251Q8N6I4 163 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 OR2L5Q8NG80 312 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 OR5B17Q8NGF7 314 aa3.6□□□□□ -1.83
USP44-208ENST00000552440 TADA1Q96BN2 335 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms