RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 C20orf196Q8IYI0 205 aa9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 MIER2Q8N344 545 aa9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 LSMEM1Q8N8F7 131 aa9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 BBS10Q8TAM1 723 aa9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 FGFBP3Q8TAT2 258 aa9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 CKAP2Q8WWK9 683 aa9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 TLCD1Q96CP7 247 aa9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 ZNF317Q96PQ6 595 aaPredicted RBP9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 EBF4Q9BQW3 602 aa9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 MRPL37Q9BZE1 423 aaKnown RBP9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 RAB1BQ9H0U4 201 aa9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 ZNF442Q9H7R0 627 aa9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 MYEF2Q9P2K5 600 aaKnown RBP9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 FZR1Q9UM11 496 aa9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 USH1CQ9Y6N9 552 aa9.96□□□□□ -0.82
PRPF40B-212ENST00000551111 TRAV36DV7A0A075B6V5 113 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 A0A087WUJ7 227 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 TRBV5-3A0A0A0MS03 114 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 LOC102725191A0A1B0GVB3 256 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 ZNF99A8MXY4 864 aaPredicted RBP9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 SLCO1B7G3V0H7 640 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 ZNF35P13682 527 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 HOXB1P14653 301 aaPredicted RBP9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 ETS2P15036 469 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 NR4A1P22736 598 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 COL8A2P25067 703 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 GTF2E2P29084 291 aaKnown RBP9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 AQP1P29972 269 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 THBS2P35442 1172 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 SEC24CP53992 1094 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 FADDQ13158 208 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 DAG1Q14118 895 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 MFSD13AQ14CX5 517 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 MAD2L1BPQ15013 274 aaPredicted RBP9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 ELFN2Q5R3F8 820 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 LRIF1Q5T3J3 769 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 WDR88Q6ZMY6 472 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 TSPYL5Q86VY4 417 aaPredicted RBP9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 ZNF786Q8N393 782 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 RNF217Q8TC41 542 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 UBASH3BQ8TF42 649 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 SLC38A4Q969I6 547 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 SLC41A3Q96GZ6 507 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 SLCO1B3Q9NPD5 702 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 RPS6KB2Q9UBS0 482 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 PRDM4Q9UKN5 801 aa9.95□□□□□ -0.82
PRPF40B-212ENST00000551111 TMEM247A6NEH6 219 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 C5orf58C9J3I9 102 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 SERPINI2O75830 405 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 HPXP02790 462 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 THY1P04216 161 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 CD79AP11912 226 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 B4GALT1P15291 398 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 ZNF14P17017 642 aaPredicted RBP9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 APEX1P27695 318 aaKnown RBP9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 PRKAR1BP31321 381 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 ARR3P36575 388 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 ALDH3B1P43353 468 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 CDH12P55289 794 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 CDK6Q00534 326 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 POU3F1Q03052 451 aaPredicted RBP9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 OR1Q1Q15612 314 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 GCNT6Q5T4J0 391 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 DHRS4L2Q6PKH6 230 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 BLOC1S3Q6QNY0 202 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 ZNF813Q6ZN06 617 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 UEVLDQ8IX04 471 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 PIK3C3Q8NEB9 887 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 ANKK1Q8NFD2 765 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 OR4D11Q8NGI4 311 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 SLC35B4Q969S0 331 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 SYT3Q9BQG1 590 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 ARMC7Q9H6L4 198 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 NARFLQ9H6Q4 476 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 C12orf10Q9HB07 376 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 TMBIM4Q9HC24 238 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 MYOZ1Q9NP98 299 aaPredicted RBP9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 THUMPD1Q9NXG2 353 aaKnown RBP9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 CCDC167Q9P0B6 97 aa9.94□□□□□ -0.82
PRPF40B-212ENST00000551111 A0A0B4J2E0 115 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 A0A1B0GX12 115 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 C11orf98E9PRG8 122 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 M0R3H8 397 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 PLPP3O14495 311 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 OR2T1O43869 369 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 ZNF500O60304 480 aaPredicted RBP9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 NCR1O76036 304 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 LYPD3O95274 346 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 IFNGR1P15260 489 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 NQO1P15559 274 aaKnown RBP9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 ITGA2P17301 1181 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 GIPRP48546 466 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 IDH3AP50213 366 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 CHN2P52757 468 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 SLC18A1P54219 525 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 CDH15P55291 814 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 SCARB2Q14108 478 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 SELPLGQ14242 412 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 RAB39AQ14964 217 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 NPTX1Q15818 432 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms