RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 HPRP00739 348 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 IGHV1-2P23083 117 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 MPGP29372 298 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 HOXC12P31275 282 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 RRM2P31350 389 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 SELENOPP49908 381 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 PRPS1P60891 318 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 CRYBG3Q68DQ2 2970 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 HMBOX1Q6NT76 420 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 TBPL2Q6SJ96 375 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 TMPRSS11FQ6ZWK6 438 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 SLC35D2Q76EJ3 337 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 SPATA24Q86W54 205 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 LSRQ86X29 649 aaPredicted RBP13.2□□□□□ -0.3
GPN3-206ENST00000549963 ZNF433Q8N7K0 673 aaPredicted RBP13.2□□□□□ -0.3
GPN3-206ENST00000549963 S100PBPQ96BU1 408 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 ZC3HAV1LQ96H79 300 aaKnown RBP13.2□□□□□ -0.3
GPN3-206ENST00000549963 LRR1Q96L50 414 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 DHRS1Q96LJ7 313 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 ALPK1Q96QP1 1244 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 POMPQ9Y244 141 aa13.2□□□□□ -0.3
GPN3-206ENST00000549963 DHRS12A0PJE2 317 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 SLC35F4A4IF30 521 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 A6NNC1 897 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 MCIDASD6RGH6 385 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 TRAF3IP2O43734 574 aaPredicted RBP13.19□□□□□ -0.3
GPN3-206ENST00000549963 PIP5K1CO60331 668 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 CIB2O75838 187 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 ZNF432O94892 652 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 HLA-DOBP13765 273 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 IFNGR1P15260 489 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 COX5AP20674 150 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 AQP2P41181 271 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 DAP3P51398 398 aaKnown RBP13.19□□□□□ -0.3
GPN3-206ENST00000549963 BIDP55957 195 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 RPL18Q07020 188 aaKnown RBP13.19□□□□□ -0.3
GPN3-206ENST00000549963 LAPTM4AQ15012 233 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 IQCCQ4KMZ1 466 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 C1QTNF12Q5T7M4 302 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 TMEM200AQ86VY9 491 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 ZNF295-AS1Q8N0V1 137 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 OR4K5Q8NGD3 323 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 OR6N1Q8NGY5 312 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 OR6X1Q8NH79 312 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 TXNDC15Q96J42 360 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 OR2M2Q96R28 347 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 LRMDAQ9H2I8 198 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 MED29Q9NX70 200 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 EDARQ9UNE0 448 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 CENPEQ02224 2701 aa13.19□□□□□ -0.3
GPN3-206ENST00000549963 ANKHD1Q8IWZ3 2542 aaKnown RBP13.18□□□□□ -0.3
GPN3-206ENST00000549963 TRBV4-1A0A0J9YWV2 114 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 SH3PXD2BA1X283 911 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 TNFRSF11BO00300 401 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 GNGT2O14610 69 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 OR10H3O60404 316 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 F13BP05160 661 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 MAKP20794 623 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 PAX7P23759 505 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 EDNRAP25101 427 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 MAGEA2P43356 314 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 SH3BGRP55822 239 aaPredicted RBP13.18□□□□□ -0.3
GPN3-206ENST00000549963 CAMK2DQ13557 499 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 TSC22D1Q15714 1073 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 STK11Q15831 433 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 ZBED5Q49AG3 693 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 ALG10Q5BKT4 473 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 TIMM23BQ5SRD1 257 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 CARD17Q5XLA6 110 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 ALKBH2Q6NS38 261 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 KLHL24Q6TFL4 600 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 C1orf162Q8NEQ5 155 aaPredicted RBP13.18□□□□□ -0.3
GPN3-206ENST00000549963 OR51A7Q8NH64 312 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 ZNF566Q969W8 418 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 SLC25A44Q96H78 314 aaPredicted RBP13.18□□□□□ -0.3
GPN3-206ENST00000549963 RSRC1Q96IZ7 334 aaKnown RBP13.18□□□□□ -0.3
GPN3-206ENST00000549963 MUS81Q96NY9 551 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 EMC6Q9BV81 110 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 REEP1Q9H902 201 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 SLC7A8Q9UHI5 535 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 HIF3AQ9Y2N7 669 aa13.18□□□□□ -0.3
GPN3-206ENST00000549963 OR5H1A6NKK0 313 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 RPL36A-HNRNPH2H7BZ11 118 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 CLOCKO15516 846 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 RAD51DO75771 328 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 CST1P01037 141 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 NR2C1P13056 603 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 CDH2P19022 906 aaPredicted RBP13.17□□□□□ -0.3
GPN3-206ENST00000549963 CRYGSP22914 178 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 CCKARP32238 428 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 RPL4P36578 427 aaKnown RBP13.17□□□□□ -0.3
GPN3-206ENST00000549963 GPR4P46093 362 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 HMGA2P52926 109 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 CLRN1P58418 232 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 ROR2Q01974 943 aaKnown RBP13.17□□□□□ -0.3
GPN3-206ENST00000549963 GK3PQ14409 553 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 PPA1Q15181 289 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 C9orf135Q5VTT2 229 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 C1orf146Q5VVC0 180 aa13.17□□□□□ -0.3
GPN3-206ENST00000549963 OR2T5Q6IEZ7 315 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms