RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 F13BP05160 661 aa12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 CPN1P15169 458 aa12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 GUCA2AQ02747 115 aa12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 TFF2Q03403 129 aa12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 ILF3Q12906 894 aaKnown RBP eCLIP12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 ZNHIT3Q15649 155 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 HYAL4Q2M3T9 481 aa12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 PCGF3Q3KNV8 242 aa12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 GLB1L2Q8IW92 636 aa12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 YAF2Q8IY57 180 aa12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 ZBTB44Q8NCP5 570 aa12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 ARID1BQ8NFD5 2236 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 SIPA1Q96FS4 1042 aa12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 KLHL15Q96M94 604 aa12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 FBXL3Q9UKT7 428 aa12.89□□□□□ -0.35
RAPGEF3-218ENST00000548919 A6NCN8 305 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 MFSD2BA6NFX1 497 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 UPK3AO75631 287 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 GPANK1O95872 356 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 GDI1P31150 447 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 KIR2DL1P43626 348 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 GPR143P51810 404 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 EFNB2P52799 333 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 RAP2BP61225 183 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 DHODHQ02127 395 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 HLXQ14774 488 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 Q499Y3 187 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 TMEM196Q5HYL7 178 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 TMEM81Q6P7N7 255 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 FRMD1Q8N878 549 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 BAHD1Q8TBE0 780 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 RPS4Y2Q8TD47 263 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 PHYHIPQ92561 330 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 ADAD1Q96M93 576 aaKnown RBP12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 MOGAT1Q96PD6 335 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 LMF1Q96S06 567 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 ING1Q9UK53 422 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 ZNF337Q9Y3M9 751 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 FXYD6-FXYD2A0A087WZ82 144 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 TCRBV16S1A1N1A0A5B0 115 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 OR2A4O95047 310 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 LPLP06858 475 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 NMBP08949 121 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 RAB40ALP0C0E4 278 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 SLC35E2P0CK97 266 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 COL9A1P20849 921 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 LTBQ06643 244 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 NFATC4Q14934 902 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 DCAF12L2Q5VW00 463 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 ZNF550Q7Z398 422 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 LRRTM1Q86UE6 522 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 OR4C16Q8NGL9 310 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 RAB40AQ8WXH6 277 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 PMM1Q92871 262 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 C3orf49Q96BT1 292 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 LRFN5Q96NI6 719 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 OR2A7Q96R45 310 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 DMRTA2Q96SC8 542 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 FXYD6Q9H0Q3 95 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 GPN1Q9HCN4 374 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 PRDM9Q9NQV7 894 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 HRASLS2Q9NWW9 162 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 IKZF2Q9UKS7 526 aa12.88□□□□□ -0.35
RAPGEF3-218ENST00000548919 IGKV1D-42A0A075B6H8 117 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 CHURC1-FNTBB4DL54 471 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 TRIM77I1YAP6 450 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 SULT1B1O43704 296 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 CTNSO60931 367 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 CALCBP10092 127 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 ZNF35P13682 527 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 SEC61A1P61619 476 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 SLC35D3Q5M8T2 416 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 OR7E24Q6IFN5 339 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 RGS7BPQ6MZT1 257 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 HDDC2Q7Z4H3 204 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 JAZF1Q86VZ6 243 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 EID2Q8N6I1 236 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 BMFQ96LC9 184 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 VSTM2LQ96N03 204 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 CCDC3Q9BQI4 270 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 SLITRK2Q9H156 845 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 C12orf10Q9HB07 376 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 FAM60AQ9NP50 221 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 DOCK8Q8NF50 2099 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 ANXA2P2A6NMY6 339 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 ARPC3O15145 178 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 FOXS1O43638 330 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 GLSO94925 669 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 ANXA2P07355 339 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 FBXO45P0C2W1 286 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 ALKBH1Q13686 389 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 TMEM240Q5SV17 173 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 FAM220AQ7Z4H9 259 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 SLC43A2Q8N370 569 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 LSM14AQ8ND56 463 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 OR6M1Q8NGM8 313 aa12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 HOXB13Q92826 284 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 MRPL48Q96GC5 212 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-218ENST00000548919 WDR92Q96MX6 357 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms