RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 DHRS12A0PJE2 317 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 SH3D21A4FU49 640 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 EFCAB9A8MZ26 197 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 CENPBD1B2RD01 187 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 KLF4O43474 513 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 RNF13O43567 381 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 PTP4A3O75365 173 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 MPGP29372 298 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 SSTR2P30874 369 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 RRM2P31350 389 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 OMPP47874 163 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 PRPS1P60891 318 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 SPIBQ01892 262 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 RPL18Q07020 188 aaKnown RBP12.76□□□□□ -0.37
DDX54-203ENST00000546869 SEC23BQ15437 767 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 STK11Q15831 433 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 FGD3Q5JSP0 725 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 SLC35D2Q76EJ3 337 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 YTHDF3Q7Z739 585 aaKnown RBP12.76□□□□□ -0.37
DDX54-203ENST00000546869 C1orf162Q8NEQ5 155 aaPredicted RBP12.76□□□□□ -0.37
DDX54-203ENST00000546869 OR52J3Q8NH60 311 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 HSD17B8Q92506 261 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 KISS1RQ969F8 398 aaPredicted RBP12.76□□□□□ -0.37
DDX54-203ENST00000546869 MUS81Q96NY9 551 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 OR2M2Q96R28 347 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 CHID1Q9BWS9 393 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 CCM2LQ9NUG4 571 aaPredicted RBP12.76□□□□□ -0.37
DDX54-203ENST00000546869 ZNF226Q9NYT6 803 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 TMCC3Q9ULS5 477 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 LYVE1Q9Y5Y7 322 aa12.76□□□□□ -0.37
DDX54-203ENST00000546869 A0A1W2PRG6 482 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 SLC35F4A4IF30 521 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 ZNF726A6NNF4 738 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 CDC42EP2O14613 210 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 SAGP10523 405 aaPredicted RBP12.75□□□□□ -0.37
DDX54-203ENST00000546869 IFNGR2P38484 337 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 AQP2P41181 271 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 IL1RL1Q01638 556 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 TGFBR3Q03167 851 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 FAPQ12884 760 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 FOXD4Q12950 439 aaPredicted RBP12.75□□□□□ -0.37
DDX54-203ENST00000546869 SNTB1Q13884 538 aaKnown RBP12.75□□□□□ -0.37
DDX54-203ENST00000546869 LAPTM4AQ15012 233 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 ZBED5Q49AG3 693 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 OR2T5Q6IEZ7 315 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 C1orf94Q6P1W5 598 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 C22orf34Q6ZV56 151 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 BHLHA15Q7RTS1 189 aaPredicted RBP12.75□□□□□ -0.37
DDX54-203ENST00000546869 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.75□□□□□ -0.37
DDX54-203ENST00000546869 HDDC2Q7Z4H3 204 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 ZER1Q7Z7L7 766 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 OAFQ86UD1 273 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 C20orf196Q8IYI0 205 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 LRRC75AQ8NAA5 344 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 OR4C15Q8NGM1 316 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 OR2T29Q8NH02 315 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 DUS3LQ96G46 650 aaKnown RBP12.75□□□□□ -0.37
DDX54-203ENST00000546869 TXNDC15Q96J42 360 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 TNFRSF13CQ96RJ3 184 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 ACTR6Q9GZN1 396 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 YY1AP1Q9H869 796 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 INIPQ9NRY2 104 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 MED29Q9NX70 200 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 STX18Q9P2W9 335 aaKnown RBP12.75□□□□□ -0.37
DDX54-203ENST00000546869 ADGRG4Q8IZF6 3080 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 UNC79Q9P2D8 2635 aa12.75□□□□□ -0.37
DDX54-203ENST00000546869 ANKHD1Q8IWZ3 2542 aaKnown RBP12.75□□□□□ -0.37
DDX54-203ENST00000546869 ZNF587BE7ETH6 402 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 C11orf98E9PRG8 122 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 TNFRSF11BO00300 401 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 CASKO14936 926 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 UPK3AO75631 287 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 BCL10O95999 233 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 IGHV3-9P01782 118 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 IGHMP01871 453 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 ITGA5P08648 1049 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 HOXB1P14653 301 aaPredicted RBP12.74□□□□□ -0.37
DDX54-203ENST00000546869 IFNGR1P15260 489 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 CRYGSP22914 178 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 PAX7P23759 505 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 IL32P24001 234 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 DAP3P51398 398 aaKnown RBP12.74□□□□□ -0.37
DDX54-203ENST00000546869 GABRA6Q16445 453 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 ALG10Q5BKT4 473 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 TIMM23BQ5SRD1 257 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 SPATA24Q86W54 205 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 C17orf78Q8N4C9 275 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 S100PBPQ96BU1 408 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 SLC25A44Q96H78 314 aaPredicted RBP12.74□□□□□ -0.37
DDX54-203ENST00000546869 MED18Q9BUE0 208 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 TXNIPQ9H3M7 391 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 MCCC2Q9HCC0 563 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 SIGLEC7Q9Y286 467 aa12.74□□□□□ -0.37
DDX54-203ENST00000546869 OR5H1A6NKK0 313 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 A6NNC1 897 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 CLOCKO15516 846 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 LYZL6O75951 148 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 KRT33AO76009 404 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 THBDP07204 575 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 FPR3P25089 353 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms