RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 SERPINI2O75830 405 aa18.08■□□□□ 0.49
HMGA2-211ENST00000545998 ADAP00813 363 aa18.08■□□□□ 0.49
HMGA2-211ENST00000545998 IFNGR1P15260 489 aa18.08■□□□□ 0.49
HMGA2-211ENST00000545998 CCKARP32238 428 aa18.08■□□□□ 0.49
HMGA2-211ENST00000545998 UGT2B10P36537 528 aa18.08■□□□□ 0.49
HMGA2-211ENST00000545998 TSPO2Q5TGU0 170 aa18.08■□□□□ 0.49
HMGA2-211ENST00000545998 CXorf67Q86X51 503 aaPredicted RBP18.08■□□□□ 0.49
HMGA2-211ENST00000545998 WDFY1Q8IWB7 410 aa18.08■□□□□ 0.49
HMGA2-211ENST00000545998 UBE2J2Q8N2K1 259 aa18.08■□□□□ 0.49
HMGA2-211ENST00000545998 OR51A7Q8NH64 312 aa18.08■□□□□ 0.49
HMGA2-211ENST00000545998 OR2M2Q96R28 347 aa18.08■□□□□ 0.49
HMGA2-211ENST00000545998 TNFRSF13CQ96RJ3 184 aa18.08■□□□□ 0.49
HMGA2-211ENST00000545998 SLC7A10Q9NS82 523 aa18.08■□□□□ 0.49
HMGA2-211ENST00000545998 U3KQV3 271 aa18.08■□□□□ 0.49
HMGA2-211ENST00000545998 SETXQ7Z333 2677 aaKnown RBP18.08■□□□□ 0.48
HMGA2-211ENST00000545998 AKAP8O43823 692 aaKnown RBP18.08■□□□□ 0.48
HMGA2-211ENST00000545998 F13BP05160 661 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 PSMB1P20618 241 aaKnown RBP18.08■□□□□ 0.48
HMGA2-211ENST00000545998 IFNGR2P38484 337 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 PEX19P40855 299 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 ACTR3P61158 418 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 SNTB1Q13884 538 aaKnown RBP18.08■□□□□ 0.48
HMGA2-211ENST00000545998 GK3PQ14409 553 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 P2RY6Q15077 328 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 ZSCAN26Q16670 478 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 ZBED5Q49AG3 693 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 ZNF770Q6IQ21 691 aaPredicted RBP18.08■□□□□ 0.48
HMGA2-211ENST00000545998 C1orf94Q6P1W5 598 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 MEX3BQ6ZN04 569 aaKnown RBP18.08■□□□□ 0.48
HMGA2-211ENST00000545998 SLC35D2Q76EJ3 337 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 TMEM123Q8N131 208 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 LINC00471Q8N535 108 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 POMGNT2Q8NAT1 580 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 RAB3IPQ96QF0 476 aaPredicted RBP18.08■□□□□ 0.48
HMGA2-211ENST00000545998 EMC6Q9BV81 110 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 MCCC2Q9HCC0 563 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 INIPQ9NRY2 104 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 ARMC1Q9NVT9 282 aa18.08■□□□□ 0.48
HMGA2-211ENST00000545998 PRR14LQ5THK1 2151 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 TACC2O95359 2948 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 SLC35F4A4IF30 521 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 OR6C65A6NJZ3 312 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 C16orf97H3BN30 126 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 PDLIM1O00151 329 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 PTP4A3O75365 173 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 CCNB2O95067 398 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 ZNF26P17031 533 aaPredicted RBP18.07■□□□□ 0.48
HMGA2-211ENST00000545998 COX5AP20674 150 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 LGALS3BPQ08380 585 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 ITGADQ13349 1161 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 KPNB1Q14974 876 aaKnown RBP18.07■□□□□ 0.48
HMGA2-211ENST00000545998 ALG10Q5BKT4 473 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 HIST2H2BCQ6DN03 193 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 PGBD2Q6P3X8 592 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 LRRC75AQ8NAA5 344 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 OR9Q2Q8NGE9 314 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 ASB6Q9NWX5 421 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 DNAJB9Q9UBS3 223 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 SIGLEC7Q9Y286 467 aa18.07■□□□□ 0.48
HMGA2-211ENST00000545998 A0A1W2PRG6 482 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 GNGT2O14610 69 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 CLOCKO15516 846 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 SLC43A1O75387 559 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 TIPRLO75663 272 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 IGHV1-2P23083 117 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 FPR3P25089 353 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 IST1P53990 364 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 BIDP55957 195 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 PRPS1P60891 318 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 FAPQ12884 760 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 MICAQ29983 383 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 SFRP5Q5T4F7 317 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 OR6X1Q8NH79 312 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 GNPDA2Q8TDQ7 276 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 LINC00470Q9BZP3 86 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 UPB1Q9UBR1 384 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 AP4S1Q9Y587 144 aa18.06■□□□□ 0.48
HMGA2-211ENST00000545998 UNC119BA6NIH7 251 aa18.05■□□□□ 0.48
HMGA2-211ENST00000545998 NPIPB13A6NJU9 1138 aa18.05■□□□□ 0.48
HMGA2-211ENST00000545998 NPIPB4C9JG80 1138 aa18.05■□□□□ 0.48
HMGA2-211ENST00000545998 UPK3AO75631 287 aa18.05■□□□□ 0.48
HMGA2-211ENST00000545998 GSSP48637 474 aa18.05■□□□□ 0.48
HMGA2-211ENST00000545998 MELKQ14680 651 aa18.05■□□□□ 0.48
HMGA2-211ENST00000545998 TMEM179BQ7Z7N9 219 aa18.05■□□□□ 0.48
HMGA2-211ENST00000545998 ADAD1Q96M93 576 aaKnown RBP18.05■□□□□ 0.48
HMGA2-211ENST00000545998 HDHD5Q9BXW7 423 aa18.05■□□□□ 0.48
HMGA2-211ENST00000545998 GPR52Q9Y2T5 361 aa18.05■□□□□ 0.48
HMGA2-211ENST00000545998 TUBAL3A6NHL2 446 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 ZNF726A6NNF4 738 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 LYZL6O75951 148 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 BCL10O95999 233 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 COX6B1P14854 86 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 DNAJA1P31689 397 aaKnown RBP18.04■□□□□ 0.48
HMGA2-211ENST00000545998 FOXG1P55316 489 aaPredicted RBP18.04■□□□□ 0.48
HMGA2-211ENST00000545998 FXYD6P3P58550 94 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 TSPAN31Q12999 210 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 CAMK2DQ13557 499 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 TSC22D1Q15714 1073 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 ACKR1Q16570 336 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 LINGO2Q7L985 606 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms