RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 CSF2RAP15509 400 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 VASPP50552 380 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 HHEXQ03014 270 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 TMEM255BQ8WV15 326 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 SMIM14Q96QK8 99 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 RBM24Q9BX46 236 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 LDAHQ9H6V9 325 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 MRPS28Q9Y2Q9 187 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 SCAF4O95104 1147 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 IGHG1P01857 330 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 IHHQ14623 411 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 EXOSC7Q15024 291 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 KCMF1Q9P0J7 381 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 M0QYG6 137 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 AIPO00170 330 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 LGI1O95970 557 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 TGFBR1P36897 503 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 PFN3P60673 137 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 OR7A5Q15622 319 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 WDR5BQ86VZ2 330 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 ZNF611Q8N823 705 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 OR14L1PQ8NHC6 308 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 APH1BQ8WW43 257 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 DIO2Q92813 273 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 UHRF2Q96PU4 802 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 STRAPQ9Y3F4 350 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 PCDHGA5Q9Y5G8 931 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 GJB3O75712 270 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 DFFBO76075 338 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 HLA-HP01893 362 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 TEAD1P28347 426 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 CSNK1A1P48729 337 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 XAF1Q6GPH4 301 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 PARS2Q7L3T8 475 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 PRSS45Q7RTY3 260 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 GLIPR2Q9H4G4 154 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 HRASLSQ9HDD0 168 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 CBY1Q9Y3M2 126 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 TJP1Q07157 1748 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 UBR2Q8IWV8 1755 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 SLCO2B1O94956 709 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 RABIFP47224 123 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 MCCD1P59942 119 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 ZNF705AQ6ZN79 300 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 SYS1Q8N2H4 156 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 APOBEC3BQ9UH17 382 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 EXO1Q9UQ84 846 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 PRAMEF27A3QJZ7 478 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 ZBTB42B2RXF5 422 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 LDB3O75112 727 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 RAB4AP20338 218 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 KIR2DL3P43628 341 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 THBS3P49746 956 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 MRPS34P82930 218 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 HNRNPA1L2Q32P51 320 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 PRAMEF9Q5VWM5 478 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 LIX1LQ8IVB5 337 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 MFSD4AQ8N468 514 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 TEAD3Q99594 435 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 C1orf198Q9H425 327 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 SPATA6Q9NWH7 488 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 TARM1B6A8C7 271 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 ZNF728P0DKX0 622 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 MAKP20794 623 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 ARRB2P32121 409 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 RPS18P62269 152 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 UBXN2BQ14CS0 331 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 CLLU1OSQ5K130 101 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 MRPL21Q7Z2W9 205 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 PLXDC1Q8IUK5 500 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 ZNF100Q8IYN0 542 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 PPP1R35Q8TAP8 253 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 ST8SIA2Q92186 375 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 TSACCQ96A04 125 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 ARHGAP9Q9BRR9 750 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 SERTAD4Q9NUC0 356 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 PLEK2Q9NYT0 353 aa13.84□□□□□ -0.19
SMARCA4-207ENST00000541122 A0A1B0GWA3 101 aa13.83□□□□□ -0.19
SMARCA4-207ENST00000541122 MRPL19P49406 292 aaKnown RBP13.83□□□□□ -0.19
SMARCA4-207ENST00000541122 SSBP1Q04837 148 aaKnown RBP13.83□□□□□ -0.19
SMARCA4-207ENST00000541122 THAP3Q8WTV1 239 aaPredicted RBP13.83□□□□□ -0.19
SMARCA4-207ENST00000541122 NMNAT3Q96T66 252 aa13.83□□□□□ -0.19
SMARCA4-207ENST00000541122 GPR171O14626 319 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 RGS13O14921 159 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 ZNF264O43296 627 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 OR2C1O95371 312 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 CD14P08571 375 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 FOLR1P15328 257 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 SLC6A11P48066 632 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 SLC7A9P82251 487 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 HTRA4P83105 476 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 HYAL4Q2M3T9 481 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 FAM69BQ5VUD6 431 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 PRSS35Q8N3Z0 413 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 DVL3Q92997 716 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 APOOQ9BUR5 198 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 HINT2Q9BX68 163 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 SELENOIQ9C0D9 397 aa13.83□□□□□ -0.2
SMARCA4-207ENST00000541122 CXXC1Q9P0U4 656 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms