RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ACVR1BP36896 505 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 SERPINB10P48595 397 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 P2RY4P51582 365 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 SLC25A1P53007 311 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 OR12D2P58182 307 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 TMED1Q13445 227 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 C1DQ13901 141 aaKnown RBP11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 GALEQ14376 348 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 ANKDD1AQ495B1 522 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 ARMC4Q5T2S8 1044 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 RPTNQ6XPR3 784 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 VASH2Q86V25 355 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 DTX1Q86Y01 620 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 SLC35F2Q8IXU6 374 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 ARIH2OSQ8N7S6 290 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 SYT14Q8NB59 555 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 MFSD8Q8NHS3 518 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 TXNDC15Q96J42 360 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 CNN2Q99439 309 aaKnown RBP11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 ALG12Q9BV10 488 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 HES7Q9BYE0 225 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 SYT4Q9H2B2 425 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 RERGLQ9H628 205 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 EXOSC4Q9NPD3 245 aaKnown RBP11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 GRIP1Q9Y3R0 1128 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 DCHS1Q96JQ0 3298 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 CNOT1A5YKK6 2376 aaKnown RBP11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 M0R3G1 203 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 OR2T1O43869 369 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 CLPXO76031 633 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 GLCEO94923 617 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 DPP4P27487 766 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 SFTPDP35247 375 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 UGT2B10P36537 528 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 RPS27P42677 84 aaKnown RBP11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 RPL27P61353 136 aaKnown RBP11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 FABP5Q01469 135 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 ROR2Q01974 943 aaKnown RBP11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 PON3Q15166 354 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 ETFDHQ16134 617 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 RSPO4Q2I0M5 234 aaPredicted RBP11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 DCAF10Q5QP82 559 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 TIGD3Q6B0B8 471 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 SPINK14Q6IE38 97 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 NHLRC1Q6VVB1 395 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 IL22RA1Q8N6P7 574 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 OR1J4Q8NGS1 313 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 OR6S1Q8NH40 331 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 DDIT4LQ96D03 193 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 FAM122AQ96E09 287 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 C5orf34Q96MH7 638 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 POTEKPQ9BYX7 375 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 NUAK2Q9H093 628 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 TXNIPQ9H3M7 391 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 CHST11Q9NPF2 352 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 ISYNA1Q9NPH2 558 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 B3GAT1Q9P2W7 334 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 CDV3Q9UKY7 258 aaKnown RBP11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 STUB1Q9UNE7 303 aa11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 CAB39Q9Y376 341 aaPredicted RBP11.02□□□□□ -0.65
AP003559.1-201ENST00000540906 DCDC2BA2VCK2 349 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 FZD7O75084 574 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 IGHMP01871 453 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 CLEC2LP0C7M8 214 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 WT1P19544 449 aaPredicted RBP11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 OPRL1P41146 370 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 TGM4P49221 684 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 TMEM176BQ3YBM2 270 aaPredicted RBP11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 TP53I3Q53FA7 332 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 EMC4Q5J8M3 183 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 GPR139Q6DWJ6 353 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 C5orf46Q6UWT4 87 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 PLEKHG7Q6ZR37 379 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 H1FNTQ75WM6 255 aaPredicted RBP11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 TMPRSS12Q86WS5 348 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 RAB43Q86YS6 212 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 UFD1Q92890 307 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 C4orf36Q96KX1 117 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 SIGLEC12Q96PQ1 595 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 OR5B2Q96R09 309 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 WDR76Q9H967 626 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 WDR70Q9NW82 654 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 TXNL4BQ9NX01 149 aaKnown RBP11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 MED29Q9NX70 200 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 PLA2G3Q9NZ20 509 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 ING1Q9UK53 422 aaPredicted RBP11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 CEP250Q9BV73 2442 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 CELSR3Q9NYQ7 3312 aa11.01□□□□□ -0.65
AP003559.1-201ENST00000540906 A0A087WV48 116 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 IGKV1D-43A0A0B4J1Z2 117 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 OR2M5A3KFT3 312 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 ANKRD33BA6NCL7 494 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 METTL15A6NJ78 407 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11□□□□□ -0.65
AP003559.1-201ENST00000540906 H0YC42 278 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 J3QLW9 94 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 PSMD9O00233 223 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 IFNGR1P15260 489 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 ZNF19P17023 458 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 CELP19835 753 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms