RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 Q8N402 240 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 HGDQ93099 445 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 ZC3HAV1LQ96H79 300 aaKnown RBP12.48□□□□□ -0.41
RTN3-210ENST00000540798 CCDC74BQ96LY2 380 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 TSSK2Q96PF2 358 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 MESP1Q9BRJ9 268 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 ZNF346Q9UL40 294 aaKnown RBP12.48□□□□□ -0.41
RTN3-210ENST00000540798 TMED7-TICAM2A0A0A6YYA0 188 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 YKT6O15498 198 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 ZNF354AO60765 605 aaPredicted RBP12.47□□□□□ -0.41
RTN3-210ENST00000540798 HEXBP07686 556 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 ITPKBP27987 946 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 TAB1Q15750 504 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 SGCBQ16585 318 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 AKAP14Q86UN6 197 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 STK35Q8TDR2 534 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 SLC26A1Q9H2B4 701 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 RASD1Q9Y272 281 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 TMED7Q9Y3B3 224 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 SUSD5O60279 629 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 DXOO77932 396 aaKnown RBP12.47□□□□□ -0.41
RTN3-210ENST00000540798 ABHD16AO95870 558 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 IGHMP01871 453 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 HIST1H2ABP04908 130 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 NPR2P20594 1047 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 DCDP81605 110 aaKnown RBP12.47□□□□□ -0.41
RTN3-210ENST00000540798 SLC6A19Q695T7 634 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 HIST3H2AQ7L7L0 130 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 MAMDC2Q7Z304 686 aaPredicted RBP12.47□□□□□ -0.41
RTN3-210ENST00000540798 KCTD20Q7Z5Y7 419 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 OR6V1Q8N148 313 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 ZNF511Q8NB15 262 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 OR8K3Q8NH51 312 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 ZNF519Q8TB69 540 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 HIST1H2ACQ93077 130 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 MNTQ99583 582 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 FSCN3Q9NQT6 498 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 RARRES3Q9UL19 164 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 KLHDC2Q9Y2U9 406 aa12.47□□□□□ -0.41
RTN3-210ENST00000540798 TRBV2A0A0J9YWF9 115 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 A8MVM7 634 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 B4DXG7 233 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 KHNYNO15037 678 aaKnown RBP12.46□□□□□ -0.41
RTN3-210ENST00000540798 SCO2O43819 266 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 CPNE3O75131 537 aaKnown RBP12.46□□□□□ -0.41
RTN3-210ENST00000540798 SLC2A2P11168 524 aaPredicted RBP12.46□□□□□ -0.41
RTN3-210ENST00000540798 RAB3BP20337 219 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 EDNRAP25101 427 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 HTR3AP46098 478 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 SLC25A35Q3KQZ1 300 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 FAM69AQ5T7M9 428 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 OR2T4Q8NH00 348 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 OR6S1Q8NH40 331 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 H3BUI4 141 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 UPK3AO75631 287 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 ARL6IP5O75915 188 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 EIF4EP06730 217 aaKnown RBP12.46□□□□□ -0.41
RTN3-210ENST00000540798 CYC1P08574 325 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 FAM157BP0CG42 384 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 RBMS1P29558 406 aaKnown RBP12.46□□□□□ -0.41
RTN3-210ENST00000540798 OR2B6P58173 313 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 IL18Q14116 193 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 C5orf46Q6UWT4 87 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 ZNF517Q6ZMY9 492 aaPredicted RBP12.46□□□□□ -0.41
RTN3-210ENST00000540798 HAVCR2Q8TDQ0 301 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 NAT6Q93015 286 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 PMEPA1Q969W9 287 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 TAS2R10Q9NYW0 307 aa12.46□□□□□ -0.41
RTN3-210ENST00000540798 ANKUB1A6NFN9 424 aa12.46□□□□□ -0.42
RTN3-210ENST00000540798 PCP4L1A6NKN8 68 aa12.46□□□□□ -0.42
RTN3-210ENST00000540798 FAM171A2A8MVW0 826 aa12.46□□□□□ -0.42
RTN3-210ENST00000540798 GMFGO60234 142 aa12.46□□□□□ -0.42
RTN3-210ENST00000540798 NANOS3P60323 173 aaKnown RBP12.46□□□□□ -0.42
RTN3-210ENST00000540798 TMEM205Q6UW68 189 aa12.46□□□□□ -0.42
RTN3-210ENST00000540798 DUSP19Q8WTR2 217 aa12.46□□□□□ -0.42
RTN3-210ENST00000540798 RNF31Q96EP0 1072 aa12.46□□□□□ -0.42
RTN3-210ENST00000540798 MAP6Q96JE9 813 aa12.46□□□□□ -0.42
RTN3-210ENST00000540798 SPSB2Q99619 263 aa12.46□□□□□ -0.42
RTN3-210ENST00000540798 MRM2Q9UI43 246 aaKnown RBP12.46□□□□□ -0.42
RTN3-210ENST00000540798 ETV2O00321 342 aaPredicted RBP12.45□□□□□ -0.42
RTN3-210ENST00000540798 RENP00797 406 aa12.45□□□□□ -0.42
RTN3-210ENST00000540798 NAGAP17050 411 aa12.45□□□□□ -0.42
RTN3-210ENST00000540798 PSMB10P40306 273 aa12.45□□□□□ -0.42
RTN3-210ENST00000540798 SUMO3P55854 103 aaPredicted RBP12.45□□□□□ -0.42
RTN3-210ENST00000540798 MRPL28Q13084 256 aaKnown RBP12.45□□□□□ -0.42
RTN3-210ENST00000540798 COL28A1Q2UY09 1125 aa12.45□□□□□ -0.42
RTN3-210ENST00000540798 C1orf140Q5VVS0 124 aa12.45□□□□□ -0.42
RTN3-210ENST00000540798 RAB43Q86YS6 212 aa12.45□□□□□ -0.42
RTN3-210ENST00000540798 MAML2Q8IZL2 1156 aaPredicted RBP12.45□□□□□ -0.42
RTN3-210ENST00000540798 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.45□□□□□ -0.42
RTN3-210ENST00000540798 MAFAQ8NHW3 353 aaPredicted RBP12.45□□□□□ -0.42
RTN3-210ENST00000540798 RGP1Q92546 391 aaPredicted RBP12.45□□□□□ -0.42
RTN3-210ENST00000540798 EXTL2Q9UBQ6 330 aa12.45□□□□□ -0.42
RTN3-210ENST00000540798 MALT1Q9UDY8 824 aa12.45□□□□□ -0.42
RTN3-210ENST00000540798 FTCDNL1E5RQL4 147 aa12.45□□□□□ -0.42
RTN3-210ENST00000540798 SLC25A12O75746 678 aa12.45□□□□□ -0.42
RTN3-210ENST00000540798 SERPINI2O75830 405 aa12.45□□□□□ -0.42
RTN3-210ENST00000540798 NUDT14O95848 222 aa12.45□□□□□ -0.42
RTN3-210ENST00000540798 EPXP11678 715 aa12.45□□□□□ -0.42
RTN3-210ENST00000540798 KIR2DL3P43628 341 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 248.2 ms