RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 FAM46AQ96IP4 442 aaKnown RBP6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 VNN3Q9NY84 501 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 ELOVL5Q9NYP7 299 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 TAS2R5Q9NYW4 299 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 PRSS50Q9UI38 385 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 AURKCQ9UQB9 309 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 RCE1Q9Y256 329 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 HIF3AQ9Y2N7 669 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 NOX1Q9Y5S8 564 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 LYVE1Q9Y5Y7 322 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 ANKHD1Q8IWZ3 2542 aaKnown RBP6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 ABCA12Q86UK0 2595 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 LRBAP50851 2863 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 TRAV27A0A087WT01 109 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 EFCAB9A8MZ26 197 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 C11orf98E9PRG8 122 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 PDLIM1O00151 329 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 KLF4O43474 513 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 AKAP8O43823 692 aaKnown RBP6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 FKBP6O75344 327 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 SERPINI2O75830 405 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 KRT36O76013 467 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 IGHV3-9P01782 118 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 SAGP10523 405 aaPredicted RBP6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 PSMB1P20618 241 aaKnown RBP6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 AHCYP23526 432 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 UGT2B10P36537 528 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 PEX19P40855 299 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 OMPP47874 163 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 SLC9A3P48764 834 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 SELENOPP49908 381 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 HMGA2P52926 109 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 CLDN17P56750 224 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 IL1RL1Q01638 556 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 GABPB1Q06547 395 aaPredicted RBP6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 FAM27E3Q08E93 113 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 SNTB1Q13884 538 aaKnown RBP6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 CCNIQ14094 377 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 EXOC3L2Q2M3D2 409 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 TSPO2Q5TGU0 170 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 C1orf146Q5VVC0 180 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 FBXW9Q5XUX1 488 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 SP5Q6BEB4 398 aaPredicted RBP6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 OR2T5Q6IEZ7 315 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 NIPAL3Q6P499 406 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 STAC2Q6ZMT1 411 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 MEX3BQ6ZN04 569 aaKnown RBP6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 AAED1Q7RTV5 226 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 PXKQ7Z7A4 578 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 CXorf67Q86X51 503 aaPredicted RBP6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 KIF18BQ86Y91 864 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 WDFY1Q8IWB7 410 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 ZNF100Q8IYN0 542 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 TMEM123Q8N131 208 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 PAPD5Q8NDF8 572 aaKnown RBP6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 OR4C15Q8NGM1 316 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 OR13C2Q8NGS9 318 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 OR2T29Q8NH02 315 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 MOSPD2Q8NHP6 518 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 RSRC1Q96IZ7 334 aaKnown RBP6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 ALKBH3Q96Q83 286 aaPredicted RBP6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 ALPK1Q96QP1 1244 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 OR2M2Q96R28 347 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 SPOCK3Q9BQ16 436 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 CHID1Q9BWS9 393 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 SLCO5A1Q9H2Y9 848 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 KRCC1Q9NPI7 259 aaPredicted RBP6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 SLC7A10Q9NS82 523 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 CCM2LQ9NUG4 571 aaPredicted RBP6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 PARPBPQ9NWS1 579 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 MED29Q9NX70 200 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 TMEM5Q9Y2B1 443 aa6.16□□□□□ -1.42
LPCAT3-209ENST00000540060 PKDREJQ9NTG1 2253 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 RAI1Q7Z5J4 1906 aaPredicted RBP6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 CSMD2Q7Z408 3487 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 NPIPB13A6NJU9 1138 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 NPIPB4C9JG80 1138 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 C16orf97H3BN30 126 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 BLOC1S5-TXNDC5H3BN57 136 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 TNFRSF11BO00300 401 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 CLOCKO15516 846 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 RNF13O43567 381 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 OR10H3O60404 316 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 CIB2O75838 187 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 OR6A2O95222 327 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 ADAP00813 363 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 CST1P01037 141 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 IGHMP01871 453 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 HIST1H2ABP04908 130 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 F13BP05160 661 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 ITGA5P08648 1049 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 COX6B1P14854 86 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 IFNGR1P15260 489 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 ZNF26P17031 533 aaPredicted RBP6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 IGHV1-2P23083 117 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 FPR3P25089 353 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 AQP2P41181 271 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 FOXG1P55316 489 aaPredicted RBP6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 FXYD6P3P58550 94 aa6.15□□□□□ -1.42
LPCAT3-209ENST00000540060 LGALS3BPQ08380 585 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms