RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 EIF1BO60739 113 aaKnown RBP12.64□□□□□ -0.39
CD4-208ENST00000538827 RAMP1O60894 148 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 FZD7O75084 574 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 SLC2A10O95528 541 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 HLA-DOBP13765 273 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 ZNF3P17036 446 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 FMO3P31513 532 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 RAC3P60763 192 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.64□□□□□ -0.39
CD4-208ENST00000538827 KLRB1Q12918 225 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 ZNF239Q16600 458 aaKnown RBP12.64□□□□□ -0.39
CD4-208ENST00000538827 PRR30Q53SZ7 412 aaPredicted RBP12.64□□□□□ -0.39
CD4-208ENST00000538827 EEF1A1P5Q5VTE0 462 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 TMEM225Q6GV28 225 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 CCDC103Q8IW40 242 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 ZNF786Q8N393 782 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 LNX2Q8N448 690 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 FAM26EQ8N5C1 309 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 ROBO4Q8WZ75 1007 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 UBE2FQ969M7 185 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 SARAFQ96BY9 339 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 GPR137Q96N19 417 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 TIMP4Q99727 224 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 PRRG4Q9BZD6 226 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 SLC25A18Q9H1K4 315 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 PNPLA3Q9NST1 481 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 UBAP1Q9NZ09 502 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 DNAJC27Q9NZQ0 273 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 GRHPRQ9UBQ7 328 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 KLHL21Q9UJP4 597 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 MCTS1Q9ULC4 181 aaKnown RBP12.64□□□□□ -0.39
CD4-208ENST00000538827 RASD1Q9Y272 281 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 PCDHGB5Q9Y5G0 923 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 HSPE1-MOB4S4R3N1 261 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 A0A1B0GVC2 190 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 MS4A18H0YCH9 400 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 H7C1C5 153 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 TLX2O43763 284 aaPredicted RBP12.63□□□□□ -0.39
CD4-208ENST00000538827 MPZL2O60487 215 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 FAM20BO75063 409 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 SMNDC1O75940 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
CD4-208ENST00000538827 WISP2O76076 250 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 TSPAN19P0C672 248 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 HIST1H1CP16403 213 aaKnown RBP12.63□□□□□ -0.39
CD4-208ENST00000538827 SDHAP31040 664 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 ACVR1BP36896 505 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 DAP3P51398 398 aaKnown RBP12.63□□□□□ -0.39
CD4-208ENST00000538827 P2RY4P51582 365 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 RIPPLY3P57055 190 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 LCN6P62502 163 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 ZP4Q12836 540 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 BCL2A1Q16548 175 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 ACKR1Q16570 336 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 MS4A18Q3C1V0 323 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 PLXDC2Q6UX71 529 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 OR52E2Q8NGJ4 325 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 OR5M9Q8NGP3 310 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 OR4K13Q8NH42 304 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 TMEM163Q8TC26 289 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 WDYHV1Q96HA8 205 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 TUBA1CQ9BQE3 449 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 FN3KQ9H479 309 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 NRIP3Q9NQ35 241 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 CMC2Q9NRP2 79 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 CLN6Q9NWW5 311 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 ZNF346Q9UL40 294 aaKnown RBP12.63□□□□□ -0.39
CD4-208ENST00000538827 NOX1Q9Y5S8 564 aa12.63□□□□□ -0.39
CD4-208ENST00000538827 RELNP78509 3460 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 NBASA2RRP1 2371 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 FAM183AA6NL82 134 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 XKRYO14609 159 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 IGHMP01871 453 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 IFNGR1P15260 489 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 ZNF43P17038 809 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 PAICSP22234 425 aaKnown RBP12.62□□□□□ -0.39
CD4-208ENST00000538827 ACVR2AP27037 513 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 NUDT6P53370 316 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 RPL27P61353 136 aaKnown RBP12.62□□□□□ -0.39
CD4-208ENST00000538827 ISL1P61371 349 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 CRMP1Q14194 572 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 PON3Q15166 354 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 MESTQ5EB52 335 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 GPR139Q6DWJ6 353 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 ABLIM2Q6H8Q1 611 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 LEG1Q6P5S2 330 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 SLC35D2Q76EJ3 337 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 FCRLAQ7L513 359 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 CXXC5Q7LFL8 322 aaKnown RBP12.62□□□□□ -0.39
CD4-208ENST00000538827 FAM122BQ7Z309 247 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 P4HA3Q7Z4N8 544 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 BCDIN3DQ7Z5W3 292 aaKnown RBP12.62□□□□□ -0.39
CD4-208ENST00000538827 CYB561A3Q8NBI2 242 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 SLC37A3Q8NCC5 494 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 OR8J1Q8NGP2 316 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 APH1BQ8WW43 257 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 ASB10Q8WXI3 467 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 OXGR1Q96P68 337 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 TXNIPQ9H3M7 391 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 MED20Q9H944 212 aa12.62□□□□□ -0.39
CD4-208ENST00000538827 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms