RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 PRRC2AP48634 2157 aaKnown RBP8.37□□□□□ -1.07
UBB-204ENST00000535788 FREM3P0C091 2139 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 PHF3Q92576 2039 aaKnown RBP8.36□□□□□ -1.07
UBB-204ENST00000535788 FAM240BA0A1B0GVZ2 78 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 RAB19A4D1S5 217 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 ITGB1BP1O14713 200 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 SEC14L5O43304 696 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 AKAP8O43823 692 aaKnown RBP8.36□□□□□ -1.07
UBB-204ENST00000535788 TSPAN2O60636 221 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 NOS1APO75052 506 aaPredicted RBP8.36□□□□□ -1.07
UBB-204ENST00000535788 ICOSLGO75144 302 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 GPX5O75715 221 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 IL2RAP01589 272 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 HPNP05981 417 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 IFI6P09912 130 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 CCL2P13500 99 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 CYP4B1P13584 511 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 PRPS1L1P21108 318 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 BGNP21810 368 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 RYKP34925 604 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 NUP107P57740 925 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 ABCE1P61221 599 aaKnown RBP8.36□□□□□ -1.07
UBB-204ENST00000535788 GALK2Q01415 458 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 TLE4Q04727 773 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 SNTA1Q13424 505 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 FLOT2Q14254 428 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 PTGR1Q14914 329 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 PNLIPRP3Q17RR3 467 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 LSM12Q3MHD2 195 aaKnown RBP8.36□□□□□ -1.07
UBB-204ENST00000535788 TEX30Q5JUR7 227 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 C6orf136Q5SQH8 315 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 TMEM81Q6P7N7 255 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 IDO2Q6ZQW0 420 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 LARP4Q71RC2 724 aaKnown RBP eCLIP8.36□□□□□ -1.074e-13■■■■■ 31.1
UBB-204ENST00000535788 EIF3MQ7L2H7 374 aaKnown RBP8.36□□□□□ -1.07
UBB-204ENST00000535788 KCTD20Q7Z5Y7 419 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 ENTHD1Q8IYW4 607 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 LINC00518Q8N0U6 118 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 ZNF786Q8N393 782 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 OR9K2Q8NGE7 335 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 OR1J4Q8NGS1 313 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 RND1Q92730 232 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 MYDGFQ969H8 173 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 MRGPRFQ96AM1 343 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 NTNG2Q96CW9 530 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 MTERF3Q96E29 417 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 DAZAP1Q96EP5 407 aaKnown RBP8.36□□□□□ -1.07
UBB-204ENST00000535788 ZBED6CLQ96FA7 236 aaPredicted RBP8.36□□□□□ -1.07
UBB-204ENST00000535788 MDFIQ99750 246 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 PSD2Q9BQI7 771 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 LMF2Q9BU23 707 aaKnown RBP8.36□□□□□ -1.07
UBB-204ENST00000535788 RIMS4Q9H426 269 aaPredicted RBP8.36□□□□□ -1.07
UBB-204ENST00000535788 Q9N2J8 555 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 EQTNQ9NQ60 294 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 ALKBH4Q9NXW9 302 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 SLC25A10Q9UBX3 287 aaPredicted RBP8.36□□□□□ -1.07
UBB-204ENST00000535788 RPH3ALQ9UNE2 315 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 EIF3LQ9Y262 564 aaKnown RBP8.36□□□□□ -1.07
UBB-204ENST00000535788 SLC6A5Q9Y345 797 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 FAM215AQ9Y5M1 114 aa8.36□□□□□ -1.07
UBB-204ENST00000535788 ZNF469Q96JG9 3925 aaPredicted RBP8.36□□□□□ -1.07
UBB-204ENST00000535788 RTTNQ86VV8 2226 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 FAM90A27PA6NNH2 459 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 C22orf46C9J442 243 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 C19orf84I3L1E1 186 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 J3QW42 95 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 SCO2O43819 266 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 WDR1O75083 606 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 CHRM2P08172 466 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 GLI4P10075 376 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 PEPDP12955 493 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 NQO2P16083 231 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 EGR1P18146 543 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 TUBG1P23258 451 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 CHRNB4P30926 498 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 RPL3P39023 403 aaKnown RBP8.35□□□□□ -1.07
UBB-204ENST00000535788 RFX3P48380 749 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 PNLIPRP2P54317 469 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 PRKAG1P54619 331 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 MANFP55145 182 aaKnown RBP8.35□□□□□ -1.07
UBB-204ENST00000535788 MRPS22P82650 360 aaKnown RBP8.35□□□□□ -1.07
UBB-204ENST00000535788 PPP2R2BQ00005 443 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 CRYZQ08257 329 aaKnown RBP8.35□□□□□ -1.07
UBB-204ENST00000535788 PMPCAQ10713 525 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 MFSD13AQ14CX5 517 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 ZNHIT3Q15649 155 aaPredicted RBP8.35□□□□□ -1.07
UBB-204ENST00000535788 TBRG1Q3YBR2 411 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 EIPR1Q53HC9 387 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 TMEM41BQ5BJD5 291 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 KHDC1LQ5JSQ8 128 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 ZBTB37Q5TC79 503 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 RTL6Q6ICC9 239 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 ACAD11Q709F0 780 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 CCDC71Q8IV32 467 aaPredicted RBP8.35□□□□□ -1.07
UBB-204ENST00000535788 FADS6Q8N9I5 356 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 WDSUB1Q8N9V3 476 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 FAM83FQ8NEG4 500 aaPredicted RBP8.35□□□□□ -1.07
UBB-204ENST00000535788 OR7A2PQ8NGA2 310 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 CA5BP1Q8WTZ4 195 aa8.35□□□□□ -1.07
UBB-204ENST00000535788 GLYATL2Q8WU03 294 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms