RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 RBMXL1Q96E39 390 aaKnown RBP8.08□□□□□ -1.12
CTNND1-232ENST00000532649 PHOX2BQ99453 314 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 NUDT22Q9BRQ3 303 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 SLC2A8Q9NY64 477 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 COL4A5P29400 1685 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 KIAA0513O60268 411 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 CTNSO60931 367 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 ALOX12BO75342 701 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 RGS11O94810 467 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 ADH4P08319 380 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 SLC35E2P0CK97 266 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 SSTR4P31391 388 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 PRSS3P35030 304 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 HLCSP50747 726 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 POU3F1Q03052 451 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-232ENST00000532649 RAB35Q15286 201 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 TMEM176BQ3YBM2 270 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-232ENST00000532649 SLC22A10Q63ZE4 541 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 SLC48A1Q6P1K1 146 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 LILRA6Q6PI73 481 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 NOXA1Q86UR1 476 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 FAM217AQ8IXS0 508 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 TMEM151AQ8N4L1 468 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 ELF4Q99607 663 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-232ENST00000532649 CPPED1Q9BRF8 314 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-232ENST00000532649 CENPOQ9BU64 300 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 PLA2G2FQ9BZM2 168 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 MMP27Q9H306 513 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 OR52D1Q9H346 318 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 GLIPR2Q9H4G4 154 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 EVA1AQ9H8M9 152 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 AGPAT4Q9NRZ5 378 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 SLC39A9Q9NUM3 307 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 B3GAT1Q9P2W7 334 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 RAD1O60671 282 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 SCGB1D1O95968 90 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 ITGB2P05107 769 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 AKAIN1P0CW23 69 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 MYF6P23409 242 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 CD1CP29017 333 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 HTR5AP47898 357 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 FAM199XQ6PEV8 388 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-232ENST00000532649 SYT13Q7L8C5 426 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 ZNF845Q96IR2 970 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-232ENST00000532649 SLC46A1Q96NT5 459 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 PKMYT1Q99640 499 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 ALG8Q9BVK2 526 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 CXorf36Q9H7Y0 433 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 KCNJ16Q9NPI9 418 aa8.08□□□□□ -1.12
CTNND1-232ENST00000532649 KLRC4-KLRK1H3BQV0 150 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 SUSD5O60279 629 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 ARSBP15848 533 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 LIM2P55344 173 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 ACVR1Q04771 509 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 MEF2DQ14814 521 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 SLC36A2Q495M3 483 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 HACD4Q5VWC8 232 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 MED25Q71SY5 747 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 GCNT2Q8N0V5 402 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 SLC35G3Q8N808 338 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 ZNF420Q8TAQ5 688 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-232ENST00000532649 SLC38A5Q8WUX1 472 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 TRUB1Q8WWH5 349 aaKnown RBP8.07□□□□□ -1.12
CTNND1-232ENST00000532649 RPP25Q9BUL9 199 aaKnown RBP8.07□□□□□ -1.12
CTNND1-232ENST00000532649 C1QTNF2Q9BXJ5 285 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 MUTYHQ9UIF7 546 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 FAM96BQ9Y3D0 163 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 PRAMEF27A3QJZ7 478 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 AGAP14A8MT82 685 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 K7EPK0 472 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 UTS2O95399 124 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 OR8U8P0C7N1 319 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 SERPINF1P36955 418 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 SLC1A3P43003 542 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 SIRPAP78324 504 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 PRAMEF9Q5VWM5 478 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 RNLSQ5VYX0 342 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 C6orf15Q6UXA7 325 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-232ENST00000532649 FAM71E2Q8N5Q1 922 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 BEST4Q8NFU0 473 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 MIB2Q96AX9 1013 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 FOXN4Q96NZ1 517 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 ULBP2Q9BZM5 246 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 ATP13A2Q9NQ11 1180 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 ANKRD10Q9NXR5 420 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 SERINC4A6NH21 518 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 PRICKLE3O43900 615 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-232ENST00000532649 SLC16A7O60669 478 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 GYPBP06028 91 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 ZNF728P0DKX0 622 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 GABRG2P18507 467 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 RAB5CP51148 216 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 ZNF585AQ6P3V2 769 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 ZNF417Q8TAU3 575 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 FGGYQ96C11 551 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 INTS14Q96SY0 518 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 MRPS2Q9Y399 296 aaKnown RBP8.07□□□□□ -1.12
CTNND1-232ENST00000532649 IGHV3-20A0A0C4DH32 117 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 LRIT2A6NDA9 550 aa8.07□□□□□ -1.12
CTNND1-232ENST00000532649 TARM1B6A8C7 271 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms