RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 FAM53BQ14153 422 aa14.08□□□□□ -0.16
PCDHA3-202ENST00000532566 MELKQ14680 651 aa14.08□□□□□ -0.16
PCDHA3-202ENST00000532566 PRAMEF20Q5VT98 475 aa14.08□□□□□ -0.16
PCDHA3-202ENST00000532566 TSSK4Q6SA08 328 aa14.08□□□□□ -0.16
PCDHA3-202ENST00000532566 SSX6Q7RTT6 188 aa14.08□□□□□ -0.16
PCDHA3-202ENST00000532566 C17orf50Q8WW18 174 aa14.08□□□□□ -0.16
PCDHA3-202ENST00000532566 GIMAP1Q8WWP7 306 aa14.08□□□□□ -0.16
PCDHA3-202ENST00000532566 LRFN5Q96NI6 719 aa14.08□□□□□ -0.16
PCDHA3-202ENST00000532566 AKIP1Q9NQ31 210 aa14.08□□□□□ -0.16
PCDHA3-202ENST00000532566 VSX1Q9NZR4 365 aaPredicted RBP14.08□□□□□ -0.16
PCDHA3-202ENST00000532566 NXT1Q9UKK6 140 aaKnown RBP14.08□□□□□ -0.16
PCDHA3-202ENST00000532566 ADAM18Q9Y3Q7 739 aa14.08□□□□□ -0.16
PCDHA3-202ENST00000532566 KCNE3Q9Y6H6 103 aa14.08□□□□□ -0.16
PCDHA3-202ENST00000532566 SIGLEC6O43699 453 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 ADAM23O75077 832 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 GLULP15104 373 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 HIST1H1CP16403 213 aaKnown RBP14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 SNU13P55769 128 aaKnown RBP14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 KCNAB1Q14722 419 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 ASB12Q8WXK4 309 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 PTTG3PQ9NZH4 202 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 TDRD15B5MCY1 1934 aaKnown RBP14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 H0YIG0 161 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 NPR2P20594 1047 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 HOXD12P35452 270 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 HYAL4Q2M3T9 481 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 PM20D2Q8IYS1 436 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 AMER3Q8N944 861 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 BBS1Q8NFJ9 593 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 NINJ1Q92982 152 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 TAS2R31P59538 309 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 LIPNQ5VXI9 398 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 OR6V1Q8N148 313 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 GPR32P1Q8NGA4 272 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 SNX18Q96RF0 628 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 POMT2Q9UKY4 750 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 SPTY2D1-AS1A0A0U1RR47 76 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 SRFP11831 508 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 SRMP19623 302 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 SYT3Q9BQG1 590 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 ARHGAP9Q9BRR9 750 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 RPP25Q9BUL9 199 aaKnown RBP14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 MFFQ9GZY8 342 aa14.07□□□□□ -0.16
PCDHA3-202ENST00000532566 NPIPB8E9PQR5 432 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 TCRBP04435 133 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 GABRG2P18507 467 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 HMGA2P52926 109 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 PCBP4P57723 403 aaKnown RBP14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 CAMK2DQ13557 499 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 NKAIN1Q4KMZ8 207 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 C12orf73Q69YU5 71 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 TDHQ8IZJ6 230 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 OR13C9Q8NGT0 318 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 ULBP3Q9BZM4 244 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 PARPBPQ9NWS1 579 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 WASF3Q9UPY6 502 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 ALOX12BO75342 701 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 ATP1B1P05026 303 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 HTR2CP28335 458 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 BIDP55957 195 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 BDH1Q02338 343 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 FCRL6Q6DN72 434 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 KIF18BQ86Y91 864 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 BPIFB2Q8N4F0 458 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 C12orf45Q8N5I9 185 aaPredicted RBP14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 ACBD4Q8NC06 268 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 MVB12AQ96EY5 273 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 PLEKHJ1Q9NW61 149 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 POU2F3Q9UKI9 436 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 ETV7Q9Y603 341 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 KNG1P01042 644 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 CD53P19397 219 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 HTR2AP28223 471 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 DIO1P49895 249 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 RAP2BP61225 183 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 HYAL1Q12794 435 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 RBMS2Q15434 407 aaKnown RBP14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 SIAH3Q8IW03 269 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 ADGRF3Q8IZF5 1079 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 KLF15Q9UIH9 416 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 MIA3Q5JRA6 1907 aa14.06□□□□□ -0.16
PCDHA3-202ENST00000532566 P2RX6O15547 441 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 WDPCPO95876 746 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 SPI1P17947 270 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 FABP5Q01469 135 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 PLA2G2FQ9BZM2 168 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 LIN7BQ9HAP6 207 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 ACOXLQ9NUZ1 547 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 RHBDD3Q9Y3P4 386 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 SCN4AP35499 1836 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 TRIM64CA6NLI5 447 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 GDF1P27539 372 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 P2RX1P51575 399 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 PCBP3P57721 371 aaKnown RBP14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 YOD1Q5VVQ6 348 aaPredicted RBP14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 COX15Q7KZN9 410 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 GDPD3Q7L5L3 318 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 CD163Q86VB7 1156 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 SNIP1Q8TAD8 396 aaKnown RBP14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 TOMM40LQ969M1 308 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms