RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 RPL22L1Q6P5R6 122 aaKnown RBP10.39□□□□□ -0.75
PTPRK-221ENST00000532331 SLC35D2Q76EJ3 337 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 LRRC56Q8IYG6 542 aaPredicted RBP10.39□□□□□ -0.75
PTPRK-221ENST00000532331 STEAP2Q8NFT2 490 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 OR4F15Q8NGB8 312 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 OR2A1Q8NGT9 310 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 KATNB1Q9BVA0 655 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 C1orf198Q9H425 327 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 FAIMQ9NVQ4 179 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 OR14J1Q9UGF5 321 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 NUBP2Q9Y5Y2 271 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 WDR90Q96KV7 1748 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 A0A0G2JMP0 313 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 B4DXG7 233 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 B8ZZF3 427 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 TSPAN12O95859 305 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 EFNA3P52797 238 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 PHC2Q8IXK0 858 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 LILRB2Q8N423 598 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 BCORP1Q8N888 145 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 IL17RDQ8NFM7 739 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 OR4M2Q8NGB6 313 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 ITFG2Q969R8 447 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 ISL2Q96A47 359 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 HYLS1Q96M11 299 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 RGCCQ9H4X1 137 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 GHRLQ9UBU3 117 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 TRIM64BA6NI03 449 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 SYT5O00445 386 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 ELAVL4P26378 380 aaKnown RBP10.39□□□□□ -0.75
PTPRK-221ENST00000532331 EVI2BP34910 448 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 AQP2P41181 271 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 ZNF91Q05481 1191 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 MEF2DQ14814 521 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 SLC22A6Q4U2R8 563 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 PMS2CLQ68D20 193 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 SPRED1Q7Z699 444 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 SFTPA1Q8IWL2 248 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 CTSFQ9UBX1 484 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 D6RAR5 112 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 IGHV3-9P01782 118 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 CRHBPP24387 322 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 ARL3P36405 182 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 OR8B8Q15620 311 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 TCTN3Q6NUS6 607 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 TMEM102Q8N9M5 508 aaPredicted RBP10.39□□□□□ -0.75
PTPRK-221ENST00000532331 APOBEC4Q8WW27 367 aaKnown RBP10.39□□□□□ -0.75
PTPRK-221ENST00000532331 C22orf15Q8WYQ4 148 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 SORCS2Q96PQ0 1159 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 DPCDQ9BVM2 203 aaPredicted RBP10.39□□□□□ -0.75
PTPRK-221ENST00000532331 FBXL4Q9UKA2 621 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 ZNF281Q9Y2X9 895 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 PLXNB2O15031 1838 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 PRAMEF27A3QJZ7 478 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 GPRIN2O60269 458 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 SLC22A5O76082 557 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 ALPLP05186 524 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 FOLR1P15328 257 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 TUBG1P23258 451 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 S100PP25815 95 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 ZNF616Q08AN1 781 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 ZNF684Q5T5D7 378 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 SLC22A25Q6T423 547 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 H1FNTQ75WM6 255 aaPredicted RBP10.38□□□□□ -0.75
PTPRK-221ENST00000532331 CARFQ8N187 725 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 PRRT1Q99946 306 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 THAP7Q9BT49 309 aaPredicted RBP10.38□□□□□ -0.75
PTPRK-221ENST00000532331 CPNE5Q9HCH3 593 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 B3GNT2Q9NY97 397 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 PLA2G3Q9NZ20 509 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 NKX6-3A6NJ46 265 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 UBFD1O14562 309 aaKnown RBP10.38□□□□□ -0.75
PTPRK-221ENST00000532331 PRAF2O60831 178 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 VAMP5O95183 116 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 OR8U9P0C7N5 309 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 OPRL1P41146 370 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 KIR2DL1P43626 348 aaPredicted RBP10.38□□□□□ -0.75
PTPRK-221ENST00000532331 SPOCK1Q08629 439 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 EIF2S3LQ2VIR3 472 aaKnown RBP10.38□□□□□ -0.75
PTPRK-221ENST00000532331 SLX4IPQ5VYV7 408 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 SIMC1Q8NDZ2 872 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 C11orf40Q8WZ69 217 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 TMEM246Q9BRR3 403 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 SEMA4CQ9C0C4 833 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 CHRNA9Q9UGM1 479 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 MYO18AQ92614 2054 aaKnown RBP10.38□□□□□ -0.75
PTPRK-221ENST00000532331 UPK1BO75841 260 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 MT-ATP6P00846 226 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 CD82P27701 267 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 SLC6A12P48065 614 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 RNF4P78317 190 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 SELENBP1Q13228 472 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 SLC46A3Q7Z3Q1 461 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 TPRA1Q86W33 373 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 SERPINA12Q8IW75 414 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 DNAJC22Q8N4W6 341 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 OR11G2Q8NGC1 345 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 BRIX1Q8TDN6 353 aaKnown RBP10.38□□□□□ -0.75
PTPRK-221ENST00000532331 PBDC1Q9BVG4 233 aa10.38□□□□□ -0.75
PTPRK-221ENST00000532331 RASD1Q9Y272 281 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms