RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 CCT8L2Q96SF2 557 aa13.59□□□□□ -0.23
CTSB-220ENST00000531089 KCTD14Q9BQ13 255 aaPredicted RBP13.59□□□□□ -0.23
CTSB-220ENST00000531089 REG4Q9BYZ8 158 aa13.59□□□□□ -0.23
CTSB-220ENST00000531089 SLC19A3Q9BZV2 496 aa13.59□□□□□ -0.23
CTSB-220ENST00000531089 MRPL39Q9NYK5 338 aaKnown RBP13.59□□□□□ -0.23
CTSB-220ENST00000531089 RIMS3Q9UJD0 308 aa13.59□□□□□ -0.23
CTSB-220ENST00000531089 GDF2Q9UK05 429 aaPredicted RBP13.59□□□□□ -0.23
CTSB-220ENST00000531089 A0A1W2PR80 420 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 KIAA1324LA8MWY0 1029 aaPredicted RBP13.58□□□□□ -0.24
CTSB-220ENST00000531089 E7EQL1 145 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 LRRN3E7EW58 273 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 AKAP8O43823 692 aaKnown RBP13.58□□□□□ -0.24
CTSB-220ENST00000531089 SHOX2O60902 331 aaPredicted RBP13.58□□□□□ -0.24
CTSB-220ENST00000531089 OR5F1O95221 314 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 LYPD3O95274 346 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 ITGA5P08648 1049 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 IFNA8P32881 189 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 GSK3BP49841 420 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 PIN1Q13526 163 aaPredicted RBP13.58□□□□□ -0.24
CTSB-220ENST00000531089 ETFDHQ16134 617 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 WDR88Q6ZMY6 472 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 TSPYL5Q86VY4 417 aaPredicted RBP13.58□□□□□ -0.24
CTSB-220ENST00000531089 UEVLDQ8IX04 471 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 GTPBP3Q969Y2 492 aaKnown RBP13.58□□□□□ -0.24
CTSB-220ENST00000531089 RADILQ96JH8 1075 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 MOGAT1Q96PD6 335 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 SPAG4Q9NPE6 437 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 NANSQ9NR45 359 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 ADA2Q9NZK5 511 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 GMPR2Q9P2T1 348 aaKnown RBP13.58□□□□□ -0.24
CTSB-220ENST00000531089 B3GAT1Q9P2W7 334 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 RCE1Q9Y256 329 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 ARFGEF3Q5TH69 2177 aa13.58□□□□□ -0.24
CTSB-220ENST00000531089 ZNF587BE7ETH6 402 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 PLPP3O14495 311 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 SLC43A1O75387 559 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 ZNF682O95780 498 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 CH25HO95992 272 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 HIST1H2ABP04908 130 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 THRBP10828 461 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 CDH2P19022 906 aaPredicted RBP13.57□□□□□ -0.24
CTSB-220ENST00000531089 AHCYP23526 432 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 CD40P25942 277 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 PUDPQ08623 228 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 HIST3H2AQ7L7L0 130 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 ANKS4BQ8N8V4 417 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 C1orf162Q8NEQ5 155 aaPredicted RBP13.57□□□□□ -0.24
CTSB-220ENST00000531089 OR5J2Q8NH18 312 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 HIST1H2ACQ93077 130 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 HS6ST2Q96MM7 605 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 PRSS27Q9BQR3 290 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 ZNF426Q9BUY5 554 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 C1QTNF6Q9BXI9 259 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 LINC00470Q9BZP3 86 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 AMBRA1Q9C0C7 1298 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 ABCD2Q9UBJ2 740 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 TAGLN3Q9UI15 199 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 ADAM21Q9UKJ8 722 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 NOX1Q9Y5S8 564 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 CUBNO60494 3623 aa13.57□□□□□ -0.24
CTSB-220ENST00000531089 KPNA4O00629 521 aaPredicted RBP13.56□□□□□ -0.24
CTSB-220ENST00000531089 GMNNO75496 209 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 ZNF432O94892 652 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 ADORA3P0DMS8 318 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 PTAFRP25105 342 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 TTKP33981 857 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 ZNF83P51522 516 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 ST3GAL3Q11203 375 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 ZNF74Q16587 644 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 C1QTNF12Q5T7M4 302 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 GKAP1Q5VSY0 366 aaPredicted RBP13.56□□□□□ -0.24
CTSB-220ENST00000531089 HMBOX1Q6NT76 420 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 KLHL17Q6TDP4 642 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 TMEM108Q6UXF1 575 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 FKBP9P1Q75LS8 142 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 CBLL1Q75N03 491 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 PXKQ7Z7A4 578 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 PIAS4Q8N2W9 510 aaPredicted RBP13.56□□□□□ -0.24
CTSB-220ENST00000531089 C17orf78Q8N4C9 275 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 FAM162AQ96A26 154 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 MDFIQ99750 246 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 FKRPQ9H9S5 495 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 MGAT4BQ9UQ53 548 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 ZNF726A6NNF4 738 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 UPK3AO75631 287 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 HPRP00739 348 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 SERPINA1P01009 418 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 MT-ND1P03886 318 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 IFNW1P05000 195 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 RBM34P42696 430 aaKnown RBP13.56□□□□□ -0.24
CTSB-220ENST00000531089 CDH11P55287 796 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 PRPS1P60891 318 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 PPP2R2BQ00005 443 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 SPOCK1Q08629 439 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 AGAP6Q5VW22 663 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 GLYATQ6IB77 296 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 C11orf71Q6IPW1 123 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 VTCN1Q7Z7D3 282 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 NKAIN4Q8IVV8 208 aa13.56□□□□□ -0.24
CTSB-220ENST00000531089 GPR137CQ8N3F9 429 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms