RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 WBP2NLQ6ICG8 309 aa9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 HOMEZQ8IX15 550 aa9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 C20orf196Q8IYI0 205 aa9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 CNPY4Q8N129 248 aa9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 CLIP4Q8N3C7 705 aa9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 GPR137CQ8N3F9 429 aa9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 C17orf53Q8N3J3 647 aaPredicted RBP9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 BHLHE22Q8NFJ8 381 aaPredicted RBP9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 FGFBP3Q8TAT2 258 aa9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 AGR3Q8TD06 166 aa9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 STK35Q8TDR2 534 aa9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 RAB39BQ96DA2 213 aa9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 KTI12Q96EK9 354 aaPredicted RBP9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 ZMAT3Q9HA38 289 aaKnown RBP9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 HINT3Q9NQE9 182 aaKnown RBP9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 NKIRAS2Q9NYR9 191 aa9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 ZNF346Q9UL40 294 aaKnown RBP9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 MMP24Q9Y5R2 645 aa9.06□□□□□ -0.96
TM9SF1-210ENST00000530563 COL7A1Q02388 2944 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 IGHV1-69-2A0A0G2JMI3 117 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 MS4A18H0YCH9 400 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 M0R3G1 203 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 COPEO14579 308 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 ZNF500O60304 480 aaPredicted RBP9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 CPSF4O95639 269 aaKnown RBP9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 HPRP00739 348 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 CD79AP11912 226 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 HLA-DOBP13765 273 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 UQCRBP14927 111 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 ZNF250P15622 560 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 GIPRP48546 466 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 RPS23P62266 143 aaKnown RBP9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 RAB1AP62820 205 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 CKAP4Q07065 602 aaKnown RBP9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 SLC9A3R2Q15599 337 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 CHI3L2Q15782 390 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 MS4A18Q3C1V0 323 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 LEG1Q6P5S2 330 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 RBMS3Q6XE24 437 aaKnown RBP9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 ZNF836Q6ZNA1 936 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 RHOUQ7L0Q8 258 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 RNF130Q86XS8 419 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 VRK2Q86Y07 508 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 ZNF440Q8IYI8 595 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 CADM2Q8N3J6 435 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 PAQR4Q8N4S7 273 aaPredicted RBP9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 CCDC63Q8NA47 563 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 PIK3C3Q8NEB9 887 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 GTF3AQ92664 365 aaKnown RBP9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 TAAR8Q969N4 342 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 MMP26Q9NRE1 261 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 PLEK2Q9NYT0 353 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 TAAR3PQ9P1P4 343 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 MARCOQ9UEW3 520 aaPredicted RBP9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 LEF1Q9UJU2 399 aaPredicted RBP9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 NUP50Q9UKX7 468 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 NOX1Q9Y5S8 564 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 TENM3Q9P273 2699 aa9.05□□□□□ -0.96
TM9SF1-210ENST00000530563 DNAH3Q8TD57 4116 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 A0A096LPI6 279 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 A0A1W2PPW3 197 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 SHBGP04278 402 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 SERPINA5P05154 406 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 KRT4P19013 534 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 RPS5P46782 204 aaKnown RBP9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 PTDSS1P48651 473 aaKnown RBP9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 LCN2P80188 198 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 HPCAP84074 193 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 BAMBIQ13145 260 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 RAB39AQ14964 217 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 MFSD13AQ14CX5 517 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 PCGF3Q3KNV8 242 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 GLIPR1L2Q4G1C9 344 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 COX20Q5RI15 118 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 GKAP1Q5VSY0 366 aaPredicted RBP9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 C4orf33Q8N1A6 199 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 SLC25A36Q96CQ1 311 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 TUBGCP3Q96CW5 907 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 LRR1Q96L50 414 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 CCDC115Q96NT0 180 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 PKP2Q99959 881 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 SLC35A5Q9BS91 424 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 MECRQ9BV79 373 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 RSPO3Q9BXY4 272 aaPredicted RBP9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 DPY30Q9C005 99 aa9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 DENND2DQ9H6A0 471 aaPredicted RBP9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 POLR3KQ9Y2Y1 108 aaPredicted RBP9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 SOX21Q9Y651 276 aaPredicted RBP9.04□□□□□ -0.96
TM9SF1-210ENST00000530563 IGKV1D-42A0A075B6H8 117 aa9.03□□□□□ -0.96
TM9SF1-210ENST00000530563 TRAPPC2LH3BP13 241 aa9.03□□□□□ -0.96
TM9SF1-210ENST00000530563 M0R082 166 aa9.03□□□□□ -0.96
TM9SF1-210ENST00000530563 AHSA1O95433 338 aa9.03□□□□□ -0.96
TM9SF1-210ENST00000530563 PATE4P0C8F1 98 aa9.03□□□□□ -0.96
TM9SF1-210ENST00000530563 B4GALT1P15291 398 aa9.03□□□□□ -0.96
TM9SF1-210ENST00000530563 RAD52P43351 418 aa9.03□□□□□ -0.96
TM9SF1-210ENST00000530563 MVDP53602 400 aa9.03□□□□□ -0.96
TM9SF1-210ENST00000530563 ERVS71-1P61550 626 aa9.03□□□□□ -0.96
TM9SF1-210ENST00000530563 HNRNPA0Q13151 305 aaKnown RBP9.03□□□□□ -0.96
TM9SF1-210ENST00000530563 GNA13Q14344 377 aa9.03□□□□□ -0.96
TM9SF1-210ENST00000530563 NKPD1Q17RQ9 610 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms