RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 CDKL4Q5MAI5 379 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 C11orf88Q6PI97 169 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 PET117Q6UWS5 81 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 CES3Q6UWW8 571 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 ABHD13Q7L211 337 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 ASPGQ86U10 573 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 LCA5Q86VQ0 697 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 SLC26A11Q86WA9 606 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 RPS19BP1Q86WX3 136 aaKnown RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 CRLF3Q8IUI8 442 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 KLHDC8AQ8IYD2 350 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 PRSS58Q8IYP2 241 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 TBC1D19Q8N5T2 526 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 TMCO5AQ8N6Q1 288 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF614Q8N883 585 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 ZFP62Q8NB50 900 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 APCDD1LQ8NCL9 501 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 NFAM1Q8NET5 270 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 TRPV3Q8NET8 790 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 TTLQ8NG68 377 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 OR9A4Q8NGU2 314 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 ACTRT1Q8TDG2 376 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 GRK7Q8WTQ7 553 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 SMAP2Q8WU79 429 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 EEF1AKMT1Q8WVE0 214 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 ST6GALNAC6Q969X2 333 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 PYCR2Q96C36 320 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 LRRC39Q96DD0 335 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 PGM2Q96G03 612 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 SNF8Q96H20 258 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 POM121L2Q96KW2 1035 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 ART5Q96L15 291 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 LURAP1Q96LR2 239 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 SIGLEC12Q96PQ1 595 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF300Q96RE9 604 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 GPR21Q99679 349 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 NPAS2Q99743 824 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 OPRPNQ99935 248 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 TRIM51Q9BSJ1 452 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 EGLN3Q9H6Z9 239 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 KCNK13Q9HB14 408 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 C20orf96Q9NUD7 363 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 MRPS28Q9Y2Q9 187 aaKnown RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 NAALAD2Q9Y3Q0 740 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 MMACHCQ9Y4U1 282 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 MMP24Q9Y5R2 645 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 MAD1L1Q9Y6D9 718 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 CPAMD8Q8IZJ3 1885 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 CROCCQ5TZA2 2017 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 TACC2O95359 2948 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 A0A0B4J203 849 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 SAGE2PA6NJ88 616 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 GABRR3A8MPY1 467 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 A8MUI8 341 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 SGK494L7N484 410 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 NDC80O14777 642 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 CHST10O43529 356 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 SELENOFO60613 162 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 VIMP08670 466 aaKnown RBP3.95□□□□□ -1.78
CSDE1-212ENST00000529046 HOXD4P09016 255 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-212ENST00000529046 IL1RNP18510 177 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 PGAM1P18669 254 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 IVDP26440 423 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 LUMP51884 338 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-212ENST00000529046 PAX9P55771 341 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 HSD17B7P56937 341 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 OR4D2P58180 307 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 MLF1P58340 268 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 ACTN3Q08043 901 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-212ENST00000529046 RGS1Q08116 209 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 BIKQ13323 160 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 TAB1Q15750 504 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 C3AR1Q16581 482 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 PPP1R3AQ16821 1122 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 ADPRMQ3LIE5 342 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 HSP90AA5PQ58FG0 334 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 SPANXN3Q5MJ09 141 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 ANKRD22Q5VYY1 191 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 SPINK14Q6IE38 97 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF770Q6IQ21 691 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-212ENST00000529046 FAM45BPQ6NSW5 357 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 TTC27Q6P3X3 843 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 CASC4Q6P4E1 433 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 CCDC137Q6PK04 289 aaKnown RBP3.95□□□□□ -1.78
CSDE1-212ENST00000529046 NHLRC1Q6VVB1 395 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 RGS9BPQ6ZS82 235 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 MSANTD1Q6ZTZ1 278 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 LANCL3Q6ZV70 420 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 CYS1Q717R9 158 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 PRSS41Q7RTY9 318 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 DOLPP1Q86YN1 238 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 LRRC8AQ8IWT6 810 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 CPNE9Q8IYJ1 553 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 OTUD6BQ8N6M0 293 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 LRTM2Q8N967 370 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF740Q8NDX6 193 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 B3GNT7Q8NFL0 401 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 OR8K3Q8NH51 312 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 LILRB4Q8NHJ6 448 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 FAM57AQ8TBR7 257 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms