RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 GPR35Q9HC97 309 aa23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 ZNF469Q96JG9 3925 aaPredicted RBP23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 HIST1H2ABP04908 130 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 HOXB1P14653 301 aaPredicted RBP23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 GSK3BP49841 420 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 CDH11P55287 796 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 PSME3P61289 254 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 RPS4XP62701 263 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 ZP4Q12836 540 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 HIST3H2AQ7L7L0 130 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 NKAIN4Q8IVV8 208 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 DEPDC4Q8N2C3 294 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 HIST1H2ACQ93077 130 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 TXNDC15Q96J42 360 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 EMC6Q9BV81 110 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 MEPEQ9NQ76 525 aaPredicted RBP23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 ZNF701Q9NV72 531 aaPredicted RBP23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 ABCD2Q9UBJ2 740 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 FLNAP21333 2647 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 MTORP42345 2549 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 ACANP16112 2415 aa23.06■■□□□ 1.28
TSPAN4-217ENST00000527644 SLC35F4A4IF30 521 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 ZNF726A6NNF4 738 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 IGF2P01344 180 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 MT-ND1P03886 318 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 SOD3P08294 240 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 PTH2RP49190 550 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 UBE2NP61088 152 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 Q5PR19 223 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 SLC22A25Q6T423 547 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 PIGWQ7Z7B1 504 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 C20orf196Q8IYI0 205 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 LRRC17Q8N6Y2 441 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 HS6ST2Q96MM7 605 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 CRLF2Q9HC73 371 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 MED29Q9NX70 200 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 TAS2R5Q9NYW4 299 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 ALPK2Q86TB3 2170 aa23.05■■□□□ 1.28
TSPAN4-217ENST00000527644 ARPC4-TTLL3A0A0A6YYG9 625 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 C11orf98E9PRG8 122 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 ASAH2BP0C7U1 165 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 IFNA8P32881 189 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 ARF1P84077 181 aaKnown RBP23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 CEACAM16Q2WEN9 425 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 PGGHGQ32M88 737 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 CARD17Q5XLA6 110 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 CBLL1Q75N03 491 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 TMEM255BQ8WV15 326 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 TMEM239Q8WW34 195 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 KCTD14Q9BQ13 255 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 B3GAT2Q9NPZ5 323 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 FAIMQ9NVQ4 179 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 POU2F3Q9UKI9 436 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 ARL2BPQ9Y2Y0 163 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 USF3Q68DE3 2245 aa23.04■■□□□ 1.28
TSPAN4-217ENST00000527644 A0A096LPE4 126 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 A0A1W2PPZ6 126 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 M0R3G1 203 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 DYNC1I1O14576 645 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 UMPSP11172 480 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 FOSL1P15407 271 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 UGT2B15P54855 530 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 SPOCK1Q08629 439 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 ST3GAL3Q11203 375 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 SLC46A3Q7Z3Q1 461 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 VTCN1Q7Z7D3 282 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 PRRC1Q96M27 445 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 NELFAQ9H3P2 528 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 MOV10Q9HCE1 1003 aaKnown RBP23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 SPAG4Q9NPE6 437 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 DLL4Q9NR61 685 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 A4GNTQ9UNA3 340 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 PLCE1Q9P212 2302 aa23.03■■□□□ 1.28
TSPAN4-217ENST00000527644 OVOL3O00110 214 aa23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 RNF13O43567 381 aa23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 SERPINI2O75830 405 aa23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 ZNF682O95780 498 aa23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 IFNW1P05000 195 aa23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 IFNGR1P15260 489 aa23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 CAMK2DQ13557 499 aa23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 PHYHD1Q5SRE7 291 aa23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 YTHDF3Q7Z739 585 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 PFN4Q8NHR9 129 aa23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 GEMIN6Q8WXD5 167 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 ZNF837Q96EG3 531 aaPredicted RBP23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 SGTBQ96EQ0 304 aa23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 ADAD1Q96M93 576 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 GRIP2Q9C0E4 1043 aa23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 MED31Q9Y3C7 131 aa23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 HEATR1Q9H583 2144 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-217ENST00000527644 ZNF99A8MXY4 864 aaPredicted RBP23.01■■□□□ 1.27
TSPAN4-217ENST00000527644 E7EQL1 145 aa23.01■■□□□ 1.27
TSPAN4-217ENST00000527644 SERPINA1P01009 418 aa23.01■■□□□ 1.27
TSPAN4-217ENST00000527644 FUT1P19526 365 aa23.01■■□□□ 1.27
TSPAN4-217ENST00000527644 IFI44LQ53G44 452 aa23.01■■□□□ 1.27
TSPAN4-217ENST00000527644 SLC35D2Q76EJ3 337 aa23.01■■□□□ 1.27
TSPAN4-217ENST00000527644 NANOGNBQ7Z5D8 188 aa23.01■■□□□ 1.27
TSPAN4-217ENST00000527644 DTX2Q86UW9 622 aa23.01■■□□□ 1.27
TSPAN4-217ENST00000527644 OR6N1Q8NGY5 312 aa23.01■■□□□ 1.27
TSPAN4-217ENST00000527644 OR6X1Q8NH79 312 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms