RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CLDN5O00501 218 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 SYNGR3O43761 229 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 CLPXO76031 633 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 ANP32DO95626 131 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 ATP1A1P05023 1023 aaKnown RBP2.54□□□□□ -2
CSDE1-209ENST00000525132 SLC2A3P11169 496 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 CDH1P12830 882 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 ZNF12P17014 697 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 EFNA1P20827 205 aaPredicted RBP2.54□□□□□ -2
CSDE1-209ENST00000525132 CA6P23280 308 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 PSMA2P25787 234 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 DNA2P51530 1060 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 SUCLG1P53597 346 aaKnown RBP2.54□□□□□ -2
CSDE1-209ENST00000525132 GAS1P54826 345 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 PPIAP62937 165 aaKnown RBP2.54□□□□□ -2
CSDE1-209ENST00000525132 CDKL1Q00532 357 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 SRYQ05066 204 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 MFGE8Q08431 387 aaPredicted RBP2.54□□□□□ -2
CSDE1-209ENST00000525132 FGL1Q08830 312 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 SMARCB1Q12824 385 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 TRAF2Q12933 501 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 DLG1Q12959 904 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 MEF2DQ14814 521 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 NCF4Q15080 339 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 EXT1Q16394 746 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 DUSP5Q16690 384 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 PARP6Q2NL67 630 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 HKDC1Q2TB90 917 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 PIP5KL1Q5T9C9 394 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 PRAMEF5Q5TYX0 476 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 LCN1P1Q5VSP4 162 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 PRAMEF6Q5VXH4 476 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 TMEM225Q6GV28 225 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 RBMS3Q6XE24 437 aaKnown RBP2.54□□□□□ -2
CSDE1-209ENST00000525132 ABHD13Q7L211 337 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 OTUD6AQ7L8S5 288 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 C17orf64Q86WR6 236 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 ZNF683Q8IZ20 524 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 SLC38A6Q8IZM9 456 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 LINC00518Q8N0U6 118 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 ARFGAP2Q8N6H7 521 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 TCEANCQ8N8B7 351 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 OR5D13Q8NGL4 314 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 ZNF473Q8WTR7 871 aaKnown RBP2.54□□□□□ -2
CSDE1-209ENST00000525132 RAPGEF5Q92565 580 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 FRZBQ92765 325 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 RPL3LQ92901 407 aaKnown RBP2.54□□□□□ -2
CSDE1-209ENST00000525132 PCED1BQ96HM7 432 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 C10orf90Q96M02 699 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 WFIKKN1Q96NZ8 548 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 ACCSQ96QU6 501 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 USP28Q96RU2 1077 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 BCL7BQ9BQE9 202 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 SLC39A3Q9BRY0 314 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 IL25Q9H293 177 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 EXO5Q9H790 373 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 FANCEQ9HB96 536 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.54□□□□□ -2
CSDE1-209ENST00000525132 NDE1Q9NXR1 346 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 UTP6Q9NYH9 597 aaKnown RBP2.54□□□□□ -2
CSDE1-209ENST00000525132 FLRT3Q9NZU0 649 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 HACD3Q9P035 362 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 SPATA7Q9P0W8 599 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 KIAA1257Q9ULG3 409 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 CHTOPQ9Y3Y2 248 aaKnown RBP2.54□□□□□ -2
CSDE1-209ENST00000525132 FKBP7Q9Y680 259 aa2.54□□□□□ -2
CSDE1-209ENST00000525132 TET2Q6N021 2002 aaPredicted RBP2.54□□□□□ -2
CSDE1-209ENST00000525132 ARFGEF3Q5TH69 2177 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 LOC105371242A0A075B767 164 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 TRBV4-1A0A0J9YWV2 114 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 LRP5LA4QPB2 252 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 GOLGA6L4A6NEF3 574 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 HNRNPCL2B2RXH8 293 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 H0YL77 283 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 WRBO00258 174 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 CCSO14618 274 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 SH2D1BO14796 132 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 EPHB6O15197 1021 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 CFLARO15519 480 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 ZNF264O43296 627 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 ZSCAN12O43309 604 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 SAP30O75446 220 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 LYNP07948 512 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 NGFRP08138 427 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 GSTA1P08263 222 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 STAG3L3P0CL85 134 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 PNMTP11086 282 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 UQCRBP14927 111 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 GCFC2P16383 781 aaKnown RBP2.53□□□□□ -2
CSDE1-209ENST00000525132 AMD1P17707 334 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 MX1P20591 662 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 NT5EP21589 574 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 PCMT1P22061 227 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 CRYGSP22914 178 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 GLRA1P23415 457 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 FASP25445 335 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 IL2RGP31785 369 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 HTR5AP47898 357 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 PCYT1AP49585 367 aa2.53□□□□□ -2
CSDE1-209ENST00000525132 FUT6P51993 359 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms