RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 STK11Q15831 433 aa13.31□□□□□ -0.28
SF3B2-202ENST00000524475 NIPAL3Q6P499 406 aa13.31□□□□□ -0.28
SF3B2-202ENST00000524475 ZNF730Q6ZMV8 503 aa13.31□□□□□ -0.28
SF3B2-202ENST00000524475 C22orf34Q6ZV56 151 aa13.31□□□□□ -0.28
SF3B2-202ENST00000524475 TMPRSS11FQ6ZWK6 438 aa13.31□□□□□ -0.28
SF3B2-202ENST00000524475 C17orf78Q8N4C9 275 aa13.31□□□□□ -0.28
SF3B2-202ENST00000524475 LRRC17Q8N6Y2 441 aa13.31□□□□□ -0.28
SF3B2-202ENST00000524475 CCDC124Q96CT7 223 aaKnown RBP13.31□□□□□ -0.28
SF3B2-202ENST00000524475 CLPTM1LQ96KA5 538 aa13.31□□□□□ -0.28
SF3B2-202ENST00000524475 ADAD1Q96M93 576 aaKnown RBP13.31□□□□□ -0.28
SF3B2-202ENST00000524475 MUS81Q96NY9 551 aa13.31□□□□□ -0.28
SF3B2-202ENST00000524475 OR2M2Q96R28 347 aa13.31□□□□□ -0.28
SF3B2-202ENST00000524475 MMADHCQ9H3L0 296 aaPredicted RBP13.31□□□□□ -0.28
SF3B2-202ENST00000524475 PRR14LQ5THK1 2151 aa13.31□□□□□ -0.28
SF3B2-202ENST00000524475 POLQO75417 2590 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 ANKRD17O75179 2603 aaKnown RBP13.3□□□□□ -0.28
SF3B2-202ENST00000524475 PDZD2O15018 2839 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 OR5H1A6NKK0 313 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 DEFB108AA8MXU0 73 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 CENPBD1B2RD01 187 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 ZNF587BE7ETH6 402 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 GSC2O15499 205 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 RNF13O43567 381 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 PIP5K1CO60331 668 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 LYZL6O75951 148 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 IGHV3-9P01782 118 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 HRGP04196 525 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 IFI30P13284 250 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 AHCYP23526 432 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 IL1RL1Q01638 556 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 GABRA6Q16445 453 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 PODNL1Q6PEZ8 512 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 HDDC2Q7Z4H3 204 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 ZDHHC21Q8IVQ6 265 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 CDK20Q8IZL9 346 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 OR6X1Q8NH79 312 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 KRCC1Q9NPI7 259 aaPredicted RBP13.3□□□□□ -0.28
SF3B2-202ENST00000524475 V9GYQ6 96 aa13.3□□□□□ -0.28
SF3B2-202ENST00000524475 SLC35F4A4IF30 521 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 KRT36O76013 467 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 PAX7P23759 505 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 HMGA2P52926 109 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 LSM11P83369 360 aaKnown RBP eCLIP13.29□□□□□ -0.28
SF3B2-202ENST00000524475 RPL18Q07020 188 aaKnown RBP13.29□□□□□ -0.28
SF3B2-202ENST00000524475 GK3PQ14409 553 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 TAF11Q15544 211 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 TAB1Q15750 504 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 FAM98BQ52LJ0 330 aaKnown RBP13.29□□□□□ -0.28
SF3B2-202ENST00000524475 BEX5Q5H9J7 111 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 ANKRD34AQ69YU3 496 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 SEZ6L2Q6UXD5 910 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 SLC35D2Q76EJ3 337 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 RRM2BQ7LG56 351 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 C20orf196Q8IYI0 205 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 MAGEE2Q8TD90 523 aaPredicted RBP13.29□□□□□ -0.28
SF3B2-202ENST00000524475 LRGUKQ96M69 825 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 CADM1Q9BY67 442 aaKnown RBP13.29□□□□□ -0.28
SF3B2-202ENST00000524475 LRMDAQ9H2I8 198 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 NGBQ9NPG2 151 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 OBP2BQ9NPH6 170 aa13.29□□□□□ -0.28
SF3B2-202ENST00000524475 STX18Q9P2W9 335 aaKnown RBP13.29□□□□□ -0.28
SF3B2-202ENST00000524475 TRBV4-1A0A0J9YWV2 114 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 CIB4A0PJX0 185 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 SH3PXD2BA1X283 911 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 ZNF726A6NNF4 738 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 CYSRT1A8MQ03 144 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 EFCAB9A8MZ26 197 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 C11orf98E9PRG8 122 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 BLOC1S5-TXNDC5H3BN57 136 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 SIAH2O43255 324 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 UPK3AO75631 287 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 DIRAS1O95057 198 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 GADD45GO95257 159 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 IGHMP01871 453 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 RAP2AP10114 183 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 SAGP10523 405 aaPredicted RBP13.28□□□□□ -0.28
SF3B2-202ENST00000524475 HOXB1P14653 301 aaPredicted RBP13.28□□□□□ -0.28
SF3B2-202ENST00000524475 IFNGR1P15260 489 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 MAKP20794 623 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 DNAJA1P31689 397 aaKnown RBP13.28□□□□□ -0.28
SF3B2-202ENST00000524475 OMPP47874 163 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 LIMS1P48059 325 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 DAP3P51398 398 aaKnown RBP13.28□□□□□ -0.28
SF3B2-202ENST00000524475 NR1H2P55055 460 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 FOXG1P55316 489 aaPredicted RBP13.28□□□□□ -0.28
SF3B2-202ENST00000524475 PRPS1P60891 318 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 SPIBQ01892 262 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 CHRNB3Q05901 458 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 FHL1Q13642 323 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 TSC22D1Q15714 1073 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 FGD3Q5JSP0 725 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 ZNF627Q7L945 461 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 GPR137CQ8N3F9 429 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 SLC25A44Q96H78 314 aaPredicted RBP13.28□□□□□ -0.28
SF3B2-202ENST00000524475 TXNDC15Q96J42 360 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 LURAP1Q96LR2 239 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 ALKBH3Q96Q83 286 aaPredicted RBP13.28□□□□□ -0.28
SF3B2-202ENST00000524475 SEPHS2Q99611 448 aa13.28□□□□□ -0.28
SF3B2-202ENST00000524475 CLEC4MQ9H2X3 399 aaPredicted RBP13.28□□□□□ -0.28
SF3B2-202ENST00000524475 INIPQ9NRY2 104 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms