RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 TUBA1AQ71U36 451 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 SPATA21Q7Z572 469 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 CCDC28AQ8IWP9 274 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 SAMD14Q8IZD0 417 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-211ENST00000522802 PTGR2Q8N8N7 351 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-211ENST00000522802 CDC26Q8NHZ8 85 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 RHEBL1Q8TAI7 183 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 C16orf78Q8WTQ4 265 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 CKAP2Q8WWK9 683 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 SELENOMQ8WWX9 145 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 YIPF5Q969M3 257 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 ZNF566Q969W8 418 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 ATP6V1E2Q96A05 226 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 LRRC39Q96DD0 335 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 ELP4Q96EB1 424 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 ZNF48Q96MX3 618 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-211ENST00000522802 AMDHD1Q96NU7 426 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 BBS4Q96RK4 519 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 CCT8L2Q96SF2 557 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 KCNS3Q9BQ31 491 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 ACPTQ9BZG2 426 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 GLIPR2Q9H4G4 154 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 BRF2Q9HAW0 419 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 ZNF275Q9NSD4 429 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-211ENST00000522802 NKX1-2Q9UD57 310 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-211ENST00000522802 CARD8Q9Y2G2 431 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 COX11Q9Y6N1 276 aa5.39□□□□□ -1.55
VPS13B-211ENST00000522802 A0A0G2JMP0 313 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 A0A0X1KG70 313 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 A0A1W2PQD3 144 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 TCRBV9S1A1TA0A576 114 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 FAM159BA6NKW6 160 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 E7ESA3 106 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 PGRMC1O00264 195 aaKnown RBP5.38□□□□□ -1.55
VPS13B-211ENST00000522802 RP2O75695 350 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 NKX2-2O95096 273 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 MPZL1O95297 269 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 CRYAAP02489 173 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 HPGDP15428 266 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 COL8A2P25067 703 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 TIA1P31483 386 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS13B-211ENST00000522802 ASMTP46597 345 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 HTR6P50406 440 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 ARL4CP56559 192 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 PRPS1P60891 318 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 HSPB3Q12988 150 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 QPRTQ15274 297 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 ATP6AP1LQ52LC2 224 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 AVPI1Q5T686 147 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 TSPO2Q5TGU0 170 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 ZNF771Q7L3S4 317 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-211ENST00000522802 ADGRG3Q86Y34 549 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 MISPQ8IVT2 679 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 ZBED8Q8IZ13 594 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 TMCO5AQ8N6Q1 288 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 C11orf44Q8N8P7 122 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 BOLLQ8N9W6 283 aaKnown RBP5.38□□□□□ -1.55
VPS13B-211ENST00000522802 NUP37Q8NFH4 326 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 OR4M2Q8NGB6 313 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 CEP70Q8NHQ1 597 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 RFWD2Q8NHY2 731 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 NANPQ8TBE9 248 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 GPR119Q8TDV5 335 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 GRK7Q8WTQ7 553 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 PHF21BQ96EK2 531 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 GPR78Q96P69 363 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 CPNE1Q99829 537 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 CITED1Q99966 193 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 RBM4BQ9BQ04 359 aaKnown RBP5.38□□□□□ -1.55
VPS13B-211ENST00000522802 PCDHAC1Q9H158 963 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 ZNF442Q9H7R0 627 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 ZNF665Q9H7R5 613 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 NTN4Q9HB63 628 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 C3orf14Q9HBI5 128 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.38□□□□□ -1.553e-7■■■■■ 32.5
VPS13B-211ENST00000522802 UBQLN4Q9NRR5 601 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 GIN1Q9NXP7 522 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 TXNDC16Q9P2K2 825 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 STEAP1Q9UHE8 339 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 ZNF225Q9UK10 706 aa5.38□□□□□ -1.55
VPS13B-211ENST00000522802 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 LOC100653049A0A140TA62 436 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 M0QZ24 198 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 SULT2B1O00204 365 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 MANBAO00462 879 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 NR5A2O00482 541 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 PPIHO43447 177 aaKnown RBP5.37□□□□□ -1.55
VPS13B-211ENST00000522802 MRPL33O75394 65 aaKnown RBP5.37□□□□□ -1.55
VPS13B-211ENST00000522802 SKAP2O75563 359 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-211ENST00000522802 KRT34O76011 436 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 JTBO76095 146 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 IGLV1-44P01699 117 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 TCN1P20061 433 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-211ENST00000522802 NPR2P20594 1047 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 NTSP30990 170 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 P2RX1P51575 399 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 CCR4P51679 360 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 KRTAP10-3P60369 221 aa5.37□□□□□ -1.55
VPS13B-211ENST00000522802 SUMO2P61956 95 aaKnown RBP5.37□□□□□ -1.55
VPS13B-211ENST00000522802 ZNF763Q0D2J5 394 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms