RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 NMNAT2Q9BZQ4 307 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 TXNIPQ9H3M7 391 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 CHCHD3Q9NX63 227 aaKnown RBP13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 LSM2Q9Y333 95 aaKnown RBP13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 HDGFL3Q9Y3E1 203 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 AKAP13Q12802 2813 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 A0A1W2PRG6 482 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 FAM166BA8MTA8 275 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 SULT2B1O00204 365 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 EFSO43281 561 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 TLX3O43711 291 aaPredicted RBP13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 POU3F1Q03052 451 aaPredicted RBP13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 ARMCX4Q5H9R4 360 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 OR2G6Q5TZ20 316 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 SLC25A25Q6KCM7 469 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 LYPD4Q6UWN0 246 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 ARIH2OSQ8N7S6 290 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 ZNF248Q8NDW4 579 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 OR6K6Q8NGW6 343 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 C12orf43Q96C57 262 aaKnown RBP13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 SFXN2Q96NB2 322 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 RERGLQ9H628 205 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 ADGRL4Q9HBW9 690 aa13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 SRA1Q9HD15 236 aaKnown RBP13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 EXOSC1Q9Y3B2 195 aaKnown RBP13.86□□□□□ -0.19
CTNNA1-236ENST00000522792 MED12Q93074 2177 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 C12orf71A8MTZ7 269 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 ZNF814B7Z6K7 855 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 H0YC42 278 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 XKRYO14609 159 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 NME2P1O60361 137 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 NOL3O60936 208 aaKnown RBP13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 RENP00797 406 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 LIMS3P0CW19 117 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 LIMS4P0CW20 117 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 IFNGR1P15260 489 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 NME2P22392 152 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 FKBP2P26885 142 aaKnown RBP13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 TGFBR2P37173 567 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 CLK1P49759 484 aaKnown RBP13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 ZP4Q12836 540 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 RNLSQ5VYX0 342 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 TMPPEQ6ZT21 453 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 PM20D2Q8IYS1 436 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 PROKR2Q8NFJ6 384 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 OR10H4Q8NGA5 316 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 ZNF519Q8TB69 540 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 MIB2Q96AX9 1013 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 COG8Q96MW5 612 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 MGLLQ99685 303 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 SYT4Q9H2B2 425 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 ZNF703Q9H7S9 590 aaPredicted RBP13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 B3GALT5Q9Y2C3 310 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 CSAG2Q9Y5P2 127 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 NPIPA5E9PKD4 350 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 H3BMQ9 156 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 J3QRE1 110 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 DCTN6O00399 190 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 IGHMP01871 453 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 IGHA1P01876 353 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 CELA3AP09093 270 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 SBK2P0C263 348 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 CD46P15529 392 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 CD36P16671 472 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 NAA10P41227 235 aaPredicted RBP13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 MEOX1P50221 254 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 RAC1P63000 192 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 PLGLB1Q02325 96 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 RUNX1T1Q06455 604 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 LGALS3BPQ08380 585 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 TMED1Q13445 227 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 PON3Q15166 354 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 SPHARQ15513 63 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 TSTQ16762 297 aaKnown RBP13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 ARMC4Q5T2S8 1044 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 LCN1P1Q5VSP4 162 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 EXD3Q8N9H8 876 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 ZNF420Q8TAQ5 688 aaPredicted RBP13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 TTTY12Q9BZ98 90 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 OR2B2Q9GZK3 357 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 MED29Q9NX70 200 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 NPIPA1Q9UND3 350 aa13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 KLF13Q9Y2Y9 288 aaPredicted RBP13.85□□□□□ -0.19
CTNNA1-236ENST00000522792 TNFSF11O14788 317 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 SEC14L5O43304 696 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 RAMP1O60894 148 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 STARP49675 285 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 P2RY4P51582 365 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 SLC25A1P53007 311 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 HCCSP53701 268 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 CLDN20P56880 219 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 SLC35A1P78382 337 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 HSF1Q00613 529 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 SLC16A12Q6ZSM3 486 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 GPAT4Q86UL3 456 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 WDFY1Q8IWB7 410 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 UBQLNLQ8IYU4 475 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 GATAD2BQ8WXI9 593 aa13.84□□□□□ -0.19
CTNNA1-236ENST00000522792 HAS2Q92819 552 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms