RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 MUS81Q96NY9 551 aa19.35■□□□□ 0.69
VEGFA-217ENST00000518538 ALKBH3Q96Q83 286 aaPredicted RBP19.35■□□□□ 0.69
VEGFA-217ENST00000518538 SLC35F4A4IF30 521 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 OR5H1A6NKK0 313 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 UPK3AO75631 287 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 DNAJC8O75937 253 aaPredicted RBP19.34■□□□□ 0.69
VEGFA-217ENST00000518538 STAMBPO95630 424 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 IFNGR1P15260 489 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 SMIM11AP58511 58 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 RPL18Q07020 188 aaKnown RBP19.34■□□□□ 0.69
VEGFA-217ENST00000518538 TRAP1Q12931 704 aaKnown RBP19.34■□□□□ 0.69
VEGFA-217ENST00000518538 STK11Q15831 433 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 GABRA6Q16445 453 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 FGD3Q5JSP0 725 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 C9orf135Q5VTT2 229 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 PGM2L1Q6PCE3 622 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 PODNL1Q6PEZ8 512 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 TBPL2Q6SJ96 375 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 ZDHHC21Q8IVQ6 265 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 ZNF347Q96SE7 839 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 EMC6Q9BV81 110 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 CENPEQ02224 2701 aa19.34■□□□□ 0.69
VEGFA-217ENST00000518538 ZNF726A6NNF4 738 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 ACOT8O14734 319 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 KLF4O43474 513 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 ATP5HO75947 161 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 SAGP10523 405 aaPredicted RBP19.33■□□□□ 0.68
VEGFA-217ENST00000518538 MAKP20794 623 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 RASSF2P50749 326 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 SPIBQ01892 262 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 BEX5Q5H9J7 111 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 SLC35D2Q76EJ3 337 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 LINGO2Q7L985 606 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 PIWIL3Q7Z3Z3 882 aaKnown RBP19.33■□□□□ 0.68
VEGFA-217ENST00000518538 CDK20Q8IZL9 346 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 GPR137CQ8N3F9 429 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 C17orf78Q8N4C9 275 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 MUCL1Q96DR8 90 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 LRR1Q96L50 414 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 LRGUKQ96M69 825 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 ADAD1Q96M93 576 aaKnown RBP19.33■□□□□ 0.68
VEGFA-217ENST00000518538 SEPHS2Q99611 448 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 FUZQ9BT04 418 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 TRIM15Q9C019 465 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 MAGIXQ9H6Y5 334 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 TMEM5Q9Y2B1 443 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 HIF3AQ9Y2N7 669 aa19.33■□□□□ 0.68
VEGFA-217ENST00000518538 DCHS2Q6V1P9 2916 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 TRBV4-1A0A0J9YWV2 114 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.32■□□□□ 0.68
VEGFA-217ENST00000518538 EFCAB9A8MZ26 197 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 RPL36A-HNRNPH2H7BZ11 118 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 AQP2P41181 271 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 MAGEA2P43356 314 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 BIDP55957 195 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 RPS4XP62701 263 aaKnown RBP19.32■□□□□ 0.68
VEGFA-217ENST00000518538 ROR2Q01974 943 aaKnown RBP19.32■□□□□ 0.68
VEGFA-217ENST00000518538 PPA1Q15181 289 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 ANKDD1AQ495B1 522 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 CARD17Q5XLA6 110 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 ALKBH2Q6NS38 261 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 HMBOX1Q6NT76 420 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 TMPRSS11FQ6ZWK6 438 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 CDC20BQ86Y33 519 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 WDFY1Q8IWB7 410 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 C20orf196Q8IYI0 205 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 OR52J3Q8NH60 311 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 OR6X1Q8NH79 312 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 MOSPD2Q8NHP6 518 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 PIK3IP1Q96FE7 263 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 BOD1Q96IK1 185 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 NGBQ9NPG2 151 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 INIPQ9NRY2 104 aa19.32■□□□□ 0.68
VEGFA-217ENST00000518538 GADD45GO95257 159 aa19.31■□□□□ 0.68
VEGFA-217ENST00000518538 F13BP05160 661 aa19.31■□□□□ 0.68
VEGFA-217ENST00000518538 LOXP28300 417 aaPredicted RBP19.31■□□□□ 0.68
VEGFA-217ENST00000518538 SLC9A3P48764 834 aa19.31■□□□□ 0.68
VEGFA-217ENST00000518538 NR1H2P55055 460 aa19.31■□□□□ 0.68
VEGFA-217ENST00000518538 SH3BGRP55822 239 aaPredicted RBP19.31■□□□□ 0.68
VEGFA-217ENST00000518538 CAMK2DQ13557 499 aa19.31■□□□□ 0.68
VEGFA-217ENST00000518538 SEZ6L2Q6UXD5 910 aa19.31■□□□□ 0.68
VEGFA-217ENST00000518538 OAFQ86UD1 273 aa19.31■□□□□ 0.68
VEGFA-217ENST00000518538 MEX3DQ86XN8 651 aaKnown RBP19.31■□□□□ 0.68
VEGFA-217ENST00000518538 KRCC1Q9NPI7 259 aaPredicted RBP19.31■□□□□ 0.68
VEGFA-217ENST00000518538 A0A1W2PRG6 482 aa19.3■□□□□ 0.68
VEGFA-217ENST00000518538 M0R3G1 203 aa19.3■□□□□ 0.68
VEGFA-217ENST00000518538 GSC2O15499 205 aa19.3■□□□□ 0.68
VEGFA-217ENST00000518538 CLOCKO15516 846 aa19.3■□□□□ 0.68
VEGFA-217ENST00000518538 BCL10O95999 233 aa19.3■□□□□ 0.68
VEGFA-217ENST00000518538 CDH2P19022 906 aaPredicted RBP19.3■□□□□ 0.68
VEGFA-217ENST00000518538 RRM2P31350 389 aa19.3■□□□□ 0.68
VEGFA-217ENST00000518538 GPR4P46093 362 aa19.3■□□□□ 0.68
VEGFA-217ENST00000518538 CHRNB3Q05901 458 aa19.3■□□□□ 0.68
VEGFA-217ENST00000518538 MELKQ14680 651 aa19.3■□□□□ 0.68
VEGFA-217ENST00000518538 LAPTM4AQ15012 233 aa19.3■□□□□ 0.68
VEGFA-217ENST00000518538 SEC23BQ15437 767 aa19.3■□□□□ 0.68
VEGFA-217ENST00000518538 FAM98BQ52LJ0 330 aaKnown RBP19.3■□□□□ 0.68
VEGFA-217ENST00000518538 ALG10Q5BKT4 473 aa19.3■□□□□ 0.68
VEGFA-217ENST00000518538 C1QTNF12Q5T7M4 302 aa19.3■□□□□ 0.68
VEGFA-217ENST00000518538 OR4K5Q8NGD3 323 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms