RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 ANKRD28O15084 1053 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 CFLARO15519 480 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 SCN2BO60939 215 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 SS18L1O75177 396 aaPredicted RBP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 CPSF4O95639 269 aaKnown RBP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 HSPA4LO95757 839 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 NUDT14O95848 222 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 CRHP06850 196 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 HOXB9P17482 250 aaPredicted RBP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 TACR3P29371 465 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 IL12AP29459 219 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 CDKN2CP42773 168 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 CCR4P51679 360 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 RPS6KA3P51812 740 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 PSMD4P55036 377 aaKnown RBP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 CLDN8P56748 225 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 ABCE1P61221 599 aaKnown RBP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 SKP2Q13309 424 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 GPR68Q15743 365 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 ZNF239Q16600 458 aaKnown RBP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 TMEM176BQ3YBM2 270 aaPredicted RBP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 TNFAIP8L3Q5GJ75 292 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 SPANXN4Q5MJ08 99 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 OR2A2Q6IF42 318 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 TNFAIP8L2Q6P589 184 aaPredicted RBP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 EMBQ6PCB8 327 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 R3HCC1LQ7Z5L2 792 aaKnown RBP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 CAMKMTQ7Z624 323 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 NUDCD3Q8IVD9 361 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 UEVLDQ8IX04 471 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 TUSC5Q8IXB3 177 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 TMCO5AQ8N6Q1 288 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 BOLLQ8N9W6 283 aaKnown RBP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 OR2V1Q8NHB1 315 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 RAB3IL1Q8TBN0 382 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 SFXN5Q8TD22 340 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 GPR119Q8TDV5 335 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 OR5P2Q8WZ92 322 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 ST8SIA4Q92187 359 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 OSTF1Q92882 214 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 NEUROG1Q92886 237 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 RAB8BQ92930 207 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 ZG16BQ96DA0 208 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 SLC35G5Q96KT7 338 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 KLHL15Q96M94 604 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 ZNF300Q96RE9 604 aaPredicted RBP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 ZNF347Q96SE7 839 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 SDF2Q99470 211 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 TMEM109Q9BVC6 243 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 TM2D2Q9BX73 214 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 NUF2Q9BZD4 464 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 ROPN1BQ9BZX4 212 aaPredicted RBP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 OR51I1Q9H343 314 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 PRDM13Q9H4Q3 707 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 ROPN1Q9HAT0 212 aaPredicted RBP5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 SLC6A13Q9NSD5 602 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 MKLN1Q9UL63 735 aa5.62□□□□□ -1.51
HMGN1P17-201ENST00000513734 ANK3Q12955 4377 aaKnown RBP5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 A0A087WZY1 265 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 GOLGA8QA0A0J9YX86 632 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 GOLGA8OA6NCC3 632 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 TRIM64A6NGJ6 449 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 TRIM64BA6NI03 449 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 ZNF814B7Z6K7 855 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 MCIDASD6RGH6 385 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 GOLGA8NF8WBI6 632 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 SDHDO14521 159 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 ZNF195O14628 629 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 CASKO14936 926 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 SMAD9O15198 467 aaKnown RBP5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 RGS16O15492 202 aaPredicted RBP5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 RAMP1O60894 148 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 GCM2O75603 506 aaPredicted RBP5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 PLGP00747 810 aaPredicted RBP5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 SLPIP03973 132 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 SERPINE1P05121 402 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 UBTFL6P0CB48 400 aaPredicted RBP5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 OR12D1P0DN82 309 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 FCGR2AP12318 317 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 HPGDP15428 266 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 DDX5P17844 614 aaKnown RBP5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 PRPS1L1P21108 318 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 ATP6V1C1P21283 382 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 SLC1A6P48664 564 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 P2RX1P51575 399 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 MVDP53602 400 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 ATP12AP54707 1039 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 C21orf58P58505 322 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 RPS3AP61247 264 aaKnown RBP5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 UFM1P61960 85 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 TUBA4AP68366 448 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 EMX2Q04743 252 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 BST1Q10588 318 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 QPRTQ15274 297 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 Q5PR19 223 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 CEP85LQ5SZL2 805 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
HMGN1P17-201ENST00000513734 TYW3Q6IPR3 259 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms