RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 DTNBP1Q96EV8 351 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 CNTNAP3BQ96NU0 1288 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 CNTNAP3Q9BZ76 1288 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 CDCP1Q9H5V8 836 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 PROK2Q9HC23 129 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 PARD6AQ9NPB6 346 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 KLHL1Q9NR64 748 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 ALKBH4Q9NXW9 302 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 FBXL4Q9UKA2 621 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 B3GALT5Q9Y2C3 310 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 GSTK1Q9Y2Q3 226 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 MRPS18CQ9Y3D5 142 aaKnown RBP7.55□□□□□ -1.2
RNF4-220ENST00000513578 PEX16Q9Y5Y5 336 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 FKBP7Q9Y680 259 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 MYO15AQ9UKN7 3530 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 FAM208BQ5VWN6 2430 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 PTPRBP23467 1997 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 IQCMA0A1B0GVH7 501 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 A0A1W2PQL4 384 aaPredicted RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 MED19A0JLT2 244 aaPredicted RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 PMS2P1A4D2B8 440 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 LIPT2A6NK58 231 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 CENPBD1B2RD01 187 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 MS4A18H0YCH9 400 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 TAF4O00268 1085 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 PHYHO14832 338 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 RNF13O43567 381 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 EFNA2O43921 213 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 RAD1O60671 282 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 OR6A2O95222 327 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 F13BP05160 661 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 CELA2AP08217 269 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 IMPDH2P12268 514 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 ZNF17P17021 662 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 F8A1P23610 371 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 CD40LGP29965 261 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 TGFBR1P36897 503 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 OPRL1P41146 370 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 RORCP51449 518 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 SLC16A1P53985 500 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 DSCR4P56555 118 aaPredicted RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 RPS3AP61247 264 aaKnown RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 RPS25P62851 125 aaKnown RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 Q0VFX4 171 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 SELENBP1Q13228 472 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 ACKR1Q16570 336 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 MS4A18Q3C1V0 323 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 TBC1D25Q3MII6 688 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 GXYLT1Q4G148 440 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 SOWAHCQ53LP3 525 aaPredicted RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 ZNF684Q5T5D7 378 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 SLC6A19Q695T7 634 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 BICRALQ6AI39 1079 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 DMKNQ6E0U4 476 aaPredicted RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 VASNQ6EMK4 673 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 OR5M10Q6IEU7 315 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 C3orf33Q6P1S2 294 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 IGF2-ASQ6U949 168 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 ARSKQ6UWY0 536 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 DHRS13Q6UX07 377 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 IL20RBQ6UXL0 311 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 NHLRC1Q6VVB1 395 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 B3GLCTQ6Y288 498 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 H1FNTQ75WM6 255 aaPredicted RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 PXKQ7Z7A4 578 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 KLBQ86Z14 1044 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 GTPBP8Q8N3Z3 284 aaPredicted RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 MFSD4AQ8N468 514 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 MS4A15Q8N5U1 240 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 TEX19Q8NA77 164 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 ZNF248Q8NDW4 579 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 OR4K17Q8NGC6 315 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 ZNF417Q8TAU3 575 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 ZPLD1Q8TCW7 415 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 RPS4Y2Q8TD47 263 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 ADAMTS17Q8TE56 1095 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 ZNRF4Q8WWF5 429 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 SLC25A36Q96CQ1 311 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 ZMYND19Q96E35 227 aaPredicted RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 TRMT61AQ96FX7 289 aaKnown RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 KCTD7Q96MP8 289 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 ZNF587Q96SQ5 575 aaPredicted RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 ALG12Q9BV10 488 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 IRF2BPLQ9H1B7 796 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 ISG20L2Q9H9L3 353 aaKnown RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 SLC24A3Q9HC58 644 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 CHST11Q9NPF2 352 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 SACM1LQ9NTJ5 587 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 HPF1Q9NWY4 346 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 P4HTMQ9NXG6 502 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 FOXJ2Q9P0K8 574 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 CRNNQ9UBG3 495 aaPredicted RBP7.54□□□□□ -1.2
RNF4-220ENST00000513578 ZMIZ1Q9ULJ6 1067 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 TRAPPC4Q9Y296 219 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 HDGFL3Q9Y3E1 203 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 HRH3Q9Y5N1 445 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 ZNF292O60281 2723 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 KNTC1P50748 2209 aa7.54□□□□□ -1.2
RNF4-220ENST00000513578 A0A1W2PRG6 482 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 PRSS37A4D1T9 235 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms