RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 GPX2P18283 190 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 PPIBP23284 216 aaKnown RBP7.54□□□□□ -1.2
PDPN-209ENST00000510906 AQP1P29972 269 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 PRKAR1BP31321 381 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 ZNF83P51522 516 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 IRX1P78414 480 aaPredicted RBP7.54□□□□□ -1.2
PDPN-209ENST00000510906 EGR4Q05215 589 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 SCARB2Q14108 478 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 SELPLGQ14242 412 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 ADRM1Q16186 407 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 GABRA6Q16445 453 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 KCNMB1Q16558 191 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 ZNF672Q499Z4 452 aaPredicted RBP7.54□□□□□ -1.2
PDPN-209ENST00000510906 RUNDC3AQ59EK9 446 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 REEP3Q6NUK4 255 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 DHRS4L2Q6PKH6 230 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 PRSS57Q6UWY2 283 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 Q71RC1 249 aaPredicted RBP7.54□□□□□ -1.2
PDPN-209ENST00000510906 AAED1Q7RTV5 226 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 DHDDSQ86SQ9 333 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 BIVMQ86UB2 503 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 GPAT4Q86UL3 456 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 P2RY8Q86VZ1 359 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 DTX3Q8N9I9 347 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 STON2Q8WXE9 905 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 SLC35B4Q969S0 331 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 TMEM45BQ96B21 275 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 KTI12Q96EK9 354 aaPredicted RBP7.54□□□□□ -1.2
PDPN-209ENST00000510906 RAX2Q96IS3 184 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 MUS81Q96NY9 551 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 WFDC6Q9BQY6 131 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 PTDSS2Q9BVG9 487 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 SF3B5Q9BWJ5 86 aaKnown RBP7.54□□□□□ -1.2
PDPN-209ENST00000510906 TAPBPLQ9BX59 468 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 TRIM2Q9C040 744 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 RABEP2Q9H5N1 569 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 CXorf56Q9H5V9 222 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 TMEM38AQ9H6F2 299 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 ZNF701Q9NV72 531 aaPredicted RBP7.54□□□□□ -1.2
PDPN-209ENST00000510906 PARPBPQ9NWS1 579 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 SEC14L4Q9UDX3 406 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 LEF1Q9UJU2 399 aaPredicted RBP7.54□□□□□ -1.2
PDPN-209ENST00000510906 PRDM4Q9UKN5 801 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 SLC25A15Q9Y619 301 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 RAI1Q7Z5J4 1906 aaPredicted RBP7.54□□□□□ -1.2
PDPN-209ENST00000510906 CADP27708 2225 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 MAP1AP78559 2803 aaPredicted RBP7.53□□□□□ -1.2
PDPN-209ENST00000510906 IGKV1D-42A0A075B6H8 117 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 A0A0G2JND7 137 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 A0A1B0GWA3 101 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 SHISA9B4DS77 424 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 ABCD4O14678 606 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 PNMTP11086 282 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 PAX1P15863 534 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 PTNP21246 168 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 SLC6A2P23975 617 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 RPS5P46782 204 aaKnown RBP7.53□□□□□ -1.2
PDPN-209ENST00000510906 ATP5J2P56134 94 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 MTPNP58546 118 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 RPS4XP62701 263 aaKnown RBP7.53□□□□□ -1.2
PDPN-209ENST00000510906 SLC25A3Q00325 362 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 LGALS3BPQ08380 585 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 SPOCK1Q08629 439 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 PGGHGQ32M88 737 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 GFOD2Q3B7J2 385 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 TOR2AQ5JU69 321 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 TMEM225Q6GV28 225 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 C6orf89Q6UWU4 347 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 CREB3L2Q70SY1 520 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 KRT73Q86Y46 540 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 PTOV1Q86YD1 416 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 KDM8Q8N371 416 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 DPP10Q8N608 796 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 WDR31Q8NA23 367 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 MFSD8Q8NHS3 518 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 SMAP2Q8WU79 429 aaPredicted RBP7.53□□□□□ -1.2
PDPN-209ENST00000510906 SLC25A36Q96CQ1 311 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 CGREF1Q99674 301 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 SPATA5L1Q9BVQ7 753 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 C1QTNF6Q9BXI9 259 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 AMBRA1Q9C0C7 1298 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 SLCO5A1Q9H2Y9 848 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 UPB1Q9UBR1 384 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 RPS6KB2Q9UBS0 482 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 CORO2BQ9UQ03 480 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 NDUFAF1Q9Y375 327 aa7.53□□□□□ -1.2
PDPN-209ENST00000510906 MAGED1Q9Y5V3 778 aaPredicted RBP7.53□□□□□ -1.2
PDPN-209ENST00000510906 DSCAMO60469 2012 aa7.52□□□□□ -1.2
PDPN-209ENST00000510906 M0R1B8 84 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 OVOL3O00110 214 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 ANGPT2O15123 496 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 TPST2O60704 377 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 TMCC2O75069 709 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 MFN2O95140 757 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 VAMP5O95183 116 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 OPN1SWP03999 348 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 CDH2P19022 906 aaPredicted RBP7.52□□□□□ -1.21
PDPN-209ENST00000510906 MPGP29372 298 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 CDKN1AP38936 164 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 SELENOPP49908 381 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms