RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 NSL1Q96IY1 281 aa11.88□□□□□ -0.51
SNF8-206ENST00000509989 MPP4Q96JB8 637 aa11.88□□□□□ -0.51
SNF8-206ENST00000509989 C7orf34Q96L11 122 aa11.88□□□□□ -0.51
SNF8-206ENST00000509989 GPR35Q9HC97 309 aa11.88□□□□□ -0.51
SNF8-206ENST00000509989 SLC17A5Q9NRA2 495 aa11.88□□□□□ -0.51
SNF8-206ENST00000509989 DCAF13Q9NV06 445 aaKnown RBP11.88□□□□□ -0.51
SNF8-206ENST00000509989 RTTNQ86VV8 2226 aa11.88□□□□□ -0.51
SNF8-206ENST00000509989 VPS13CQ709C8 3753 aa11.88□□□□□ -0.51
SNF8-206ENST00000509989 A0A087WUU8 490 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 SHISA9B4DS77 424 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 ARPC2O15144 300 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 OR7A10O76100 309 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 RAF1P04049 648 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 SEMG1P04279 462 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 IFNW1P05000 195 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 F13BP05160 661 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 UMPSP11172 480 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 HSD17B1P14061 328 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 ATP6V1B2P21281 511 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 AQP2P41181 271 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 BIDP55957 195 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 RPL18Q07020 188 aaKnown RBP11.87□□□□□ -0.51
SNF8-206ENST00000509989 ACKR1Q16570 336 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 CEACAM16Q2WEN9 425 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 TBRG1Q3YBR2 411 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 B3GLCTQ6Y288 498 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 NRMQ8IXM6 262 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 OFCC1Q8IZS5 231 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 IGFBPL1Q8WX77 278 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 GEMIN6Q8WXD5 167 aaKnown RBP11.87□□□□□ -0.51
SNF8-206ENST00000509989 AKAP1Q92667 903 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNF8-206ENST00000509989 SGTBQ96EQ0 304 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 CLPTM1LQ96KA5 538 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 LINC00470Q9BZP3 86 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 FKRPQ9H9S5 495 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 FANCFQ9NPI8 374 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 NANSQ9NR45 359 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 RCE1Q9Y256 329 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 CORINQ9Y5Q5 1042 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 ENPP4Q9Y6X5 453 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 ACANP16112 2415 aa11.87□□□□□ -0.51
SNF8-206ENST00000509989 BLOC1S5-TXNDC5H3BN57 136 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 M0R1B8 84 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 PDE5AO76074 875 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 MT-ATP6P00846 226 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 CELA3BP08861 270 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 IFI30P13284 250 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 ZNF26P17031 533 aaPredicted RBP11.86□□□□□ -0.51
SNF8-206ENST00000509989 MXRA7P84157 204 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 MS4A2Q01362 244 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 ZP4Q12836 540 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 KEAP1Q14145 624 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 SEC23BQ15437 767 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 CYP2R1Q6VVX0 501 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 SLC35D2Q76EJ3 337 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 PXKQ7Z7A4 578 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 IGFN1Q86VF2 1251 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 C20orf196Q8IYI0 205 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 POMGNT2Q8NAT1 580 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 LZICQ8WZA0 190 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 SLC19A3Q9BZV2 496 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 NOX3Q9HBY0 568 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 CRLF2Q9HC73 371 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 NDUFAF4Q9P032 175 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 ZNF229Q9UJW7 825 aa11.86□□□□□ -0.51
SNF8-206ENST00000509989 TRAV27A0A087WT01 109 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 TRBV4-1A0A0J9YWV2 114 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 ZNF587BE7ETH6 402 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 CDC42EP2O14613 210 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 ABCD4O14678 606 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 RNF13O43567 381 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 SLC43A1O75387 559 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 KRT33AO76009 404 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 GOSR1O95249 250 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 TSPAN19P0C672 248 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 DNASE1P24855 282 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 RBM34P42696 430 aaKnown RBP11.85□□□□□ -0.51
SNF8-206ENST00000509989 GPR4P46093 362 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 MYBPC1Q00872 1141 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 ST3GAL3Q11203 375 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 MFSD13AQ14CX5 517 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 DEFB113Q30KQ7 82 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 LRFN4Q6PJG9 635 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 NANOGNBQ7Z5D8 188 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 CLDN22Q8N7P3 220 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 LRRC75AQ8NAA5 344 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 PIK3C3Q8NEB9 887 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 FGFBP3Q8TAT2 258 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 BCAS4Q8TDM0 211 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 MUCL1Q96DR8 90 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 TNFRSF13CQ96RJ3 184 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 FNDC11Q9BVV2 318 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 GORASP2Q9H8Y8 452 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 MED31Q9Y3C7 131 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 RNF115Q9Y4L5 304 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 NOX1Q9Y5S8 564 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 ARFGEF3Q5TH69 2177 aa11.85□□□□□ -0.51
SNF8-206ENST00000509989 IGKV1D-43A0A0B4J1Z2 117 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 E7EQL1 145 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 RPL36A-HNRNPH2H7BZ11 118 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms