RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 SLC22A11Q9NSA0 550 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 SNTG1Q9NSN8 517 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 QPCTLQ9NXS2 382 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 NUP205Q92621 2012 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 NUMA1Q14980 2115 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 TMEM269A0A1B0GVZ9 245 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 METTL15A6NJ78 407 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 H7C1C5 153 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 CDK2AP1O14519 115 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 FCMRO60667 390 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 QDPRP09417 244 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 COX6A1P12074 109 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 DIO1P49895 249 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 SLC37A1P57057 533 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 LCN6P62502 163 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 PRKCDQ05655 676 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 C19orf57Q0VDD7 668 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 RAB40BQ12829 278 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 SMCO1Q147U7 214 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 KCNJ8Q15842 424 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 AWAT2Q6E213 333 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 ZNF322Q6U7Q0 402 aaPredicted RBP4.66□□□□□ -1.66
PHF3-210ENST00000509876 UBE3DQ7Z6J8 389 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 OR10D3Q8NH80 312 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 CNIH3Q8TBE1 160 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 TRMT10AQ8TBZ6 339 aaKnown RBP4.66□□□□□ -1.66
PHF3-210ENST00000509876 SLC7A6OSQ96CW6 309 aaPredicted RBP4.66□□□□□ -1.66
PHF3-210ENST00000509876 ZNF442Q9H7R0 627 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 MEPEQ9NQ76 525 aaPredicted RBP4.66□□□□□ -1.66
PHF3-210ENST00000509876 PLEKHA6Q9Y2H5 1048 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 MSRB2Q9Y3D2 182 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 PEX16Q9Y5Y5 336 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 TRPM6Q9BX84 2022 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 ANK1P16157 1881 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 FUOMA2VDF0 154 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 C21orf58P58505 322 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 OR8B8Q15620 311 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 ZNF141Q15928 474 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 KRT74Q7RTS7 529 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 FUNDC1Q8IVP5 155 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 OR5D14Q8NGL3 314 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 TMEM203Q969S6 136 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 C11orf24Q96F05 449 aaPredicted RBP4.66□□□□□ -1.66
PHF3-210ENST00000509876 FOXN4Q96NZ1 517 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 EGLN3Q9H6Z9 239 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 C12orf10Q9HB07 376 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 TMEM138Q9NPI0 162 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 KCNG2Q9UJ96 466 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 MIA3Q5JRA6 1907 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 PLXNA3P51805 1871 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 PLXNA4Q9HCM2 1894 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 FAM230AA0A1W2PPH8 454 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 TCRBV3S1A0A5B6 114 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 TRAPPC2LH3BP13 241 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 NTN3O00634 580 aaPredicted RBP4.66□□□□□ -1.66
PHF3-210ENST00000509876 CD96P40200 585 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 MRPL19P49406 292 aaKnown RBP4.66□□□□□ -1.66
PHF3-210ENST00000509876 SNU13P55769 128 aaKnown RBP4.66□□□□□ -1.66
PHF3-210ENST00000509876 GABARAPL2P60520 117 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 SQSTM1Q13501 440 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 RAB11BQ15907 218 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 RNASE12Q5GAN4 147 aaKnown RBP4.66□□□□□ -1.66
PHF3-210ENST00000509876 TMEM236Q5W0B7 351 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 CEACAM19Q7Z692 300 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 SPACA3Q8IXA5 215 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 FAM83FQ8NEG4 500 aaPredicted RBP4.66□□□□□ -1.66
PHF3-210ENST00000509876 PIGCQ92535 297 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 FAM46BQ96A09 425 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 S100A16Q96FQ6 103 aaKnown RBP4.66□□□□□ -1.66
PHF3-210ENST00000509876 PLAC1Q9HBJ0 212 aa4.66□□□□□ -1.66
PHF3-210ENST00000509876 MITFO75030 526 aaPredicted RBP4.65□□□□□ -1.66
PHF3-210ENST00000509876 SCGNO76038 276 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 GASTP01350 101 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 MT-ND2P03891 347 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 TP53P04637 393 aaPredicted RBP4.65□□□□□ -1.66
PHF3-210ENST00000509876 FBXO45P0C2W1 286 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 CT62P0C5K7 136 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 STARP49675 285 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 HERV-K104P61576 105 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 ARL6IP1Q15041 203 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 TBPL2Q6SJ96 375 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 CHDHQ8NE62 594 aaPredicted RBP4.65□□□□□ -1.66
PHF3-210ENST00000509876 GPR148Q8TDV2 347 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 PDCD10Q9BUL8 212 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 CST11Q9H112 138 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 SLC26A1Q9H2B4 701 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 PIGMQ9H3S5 423 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 CPNE5Q9HCH3 593 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 ABCD2Q9UBJ2 740 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 KCNN3Q9UGI6 736 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 IL17BQ9UHF5 180 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 FBXO9Q9UK97 447 aaPredicted RBP4.65□□□□□ -1.66
PHF3-210ENST00000509876 A0A1B0GTL3 188 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 CDX4O14627 284 aaPredicted RBP4.65□□□□□ -1.66
PHF3-210ENST00000509876 APOL3O95236 402 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 HTR3BO95264 441 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 NTRK2Q16620 822 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 TP53I3Q53FA7 332 aa4.65□□□□□ -1.66
PHF3-210ENST00000509876 FAM198BQ6UWH4 519 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms