RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 SMIM21Q3B7S5 101 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 MGAT5BQ3V5L5 792 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 SLC9C1Q4G0N8 1177 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 TIMM23BQ5SRD1 257 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 ATRNL1Q5VV63 1379 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 SAXO2Q658L1 398 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 FCRL6Q6DN72 434 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 TMEM225Q6GV28 225 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 KCNIP4Q6PIL6 250 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 FAM159AQ6UWV7 190 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 HACD2Q6Y1H2 254 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 CREB3L2Q70SY1 520 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 AHSA2Q719I0 299 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 LINGO2Q7L985 606 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 SLC16A13Q7RTY0 426 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 RANBP3LQ86VV4 465 aaPredicted RBP4.08□□□□□ -1.76
NIPBL-206ENST00000509429 CARM1Q86X55 608 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 RNF130Q86XS8 419 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 GLB1L2Q8IW92 636 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 DDX60Q8IY21 1712 aaKnown RBP4.08□□□□□ -1.76
NIPBL-206ENST00000509429 ZNF595Q8IYB9 648 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 LAS2Q8IYD9 372 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 C16orf71Q8IYS4 520 aaPredicted RBP4.08□□□□□ -1.76
NIPBL-206ENST00000509429 PQLC1Q8N2U9 271 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 CLIP4Q8N3C7 705 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 STPG2Q8N412 459 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 EIF4E3Q8N5X7 224 aaKnown RBP4.08□□□□□ -1.76
NIPBL-206ENST00000509429 C4orf32Q8N8J7 132 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 CDRT4Q8N9R6 151 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 SLC44A5Q8NCS7 719 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 OR4F15Q8NGB8 312 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 OR2AP1Q8NGE2 309 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 OR1L4Q8NGR5 311 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 OR10K1Q8NGX5 313 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 SLC35B2Q8TB61 432 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 SOCS4Q8WXH5 440 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 FKBP10Q96AY3 582 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 MAGEB18Q96M61 343 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 Q96MF0 132 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 VAT1Q99536 393 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 PHB2Q99623 299 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 EPYCQ99645 322 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 BTBD10Q9BSF8 475 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 ELOVL1Q9BW60 279 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 HDHD5Q9BXW7 423 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 TEX101Q9BY14 249 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 ELOVL3Q9HB03 270 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 PLEKHA1Q9HB21 404 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 IL1RL2Q9HB29 575 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 Q9N2J8 555 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 AGPAT4Q9NRZ5 378 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 PIPOXQ9P0Z9 390 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 GHRLQ9UBU3 117 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 SEC14L4Q9UDX3 406 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 MED23Q9ULK4 1368 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 MEMO1Q9Y316 297 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 CMAHPQ9Y471 501 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 COLEC10Q9Y6Z7 277 aa4.08□□□□□ -1.76
NIPBL-206ENST00000509429 CHD5Q8TDI0 1954 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 AFDNP55196 1824 aaKnown RBP4.07□□□□□ -1.76
NIPBL-206ENST00000509429 ZNF142P52746 1687 aaPredicted RBP4.07□□□□□ -1.76
NIPBL-206ENST00000509429 MEIOCA2RUB1 952 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 GMNCA6NCL1 334 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 CENPXA8MT69 81 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 I3L4J1 428 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 I6L893 689 aaPredicted RBP4.07□□□□□ -1.76
NIPBL-206ENST00000509429 SDHDO14521 159 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 LDB2O43679 373 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 SH3BGRLO75368 114 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 KHDRBS3O75525 346 aaKnown RBP4.07□□□□□ -1.76
NIPBL-206ENST00000509429 PAPSS2O95340 614 aaPredicted RBP4.07□□□□□ -1.76
NIPBL-206ENST00000509429 UTS2O95399 124 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 MT-CYBP00156 380 aaPredicted RBP4.07□□□□□ -1.76
NIPBL-206ENST00000509429 RPLP0P05388 317 aaKnown RBP4.07□□□□□ -1.76
NIPBL-206ENST00000509429 OR10J4P0C629 311 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 OR8U9P0C7N5 309 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 ATXN1LP0C7T5 689 aaKnown RBP4.07□□□□□ -1.76
NIPBL-206ENST00000509429 AKR1C4P17516 323 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 BCKDHBP21953 392 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 AZGP1P25311 298 aaKnown RBP4.07□□□□□ -1.76
NIPBL-206ENST00000509429 GJB2P29033 226 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 CASP1P29466 404 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 UQCRC1P31930 480 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 IFNGR2P38484 337 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 RBM34P42696 430 aaKnown RBP4.07□□□□□ -1.76
NIPBL-206ENST00000509429 UQCRFS1P47985 274 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 TTPAP49638 278 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 EFNA3P52797 238 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 GALCP54803 685 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 HMGCS2P54868 508 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 COPZ1P61923 177 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 RPS6P62753 249 aaKnown RBP4.07□□□□□ -1.76
NIPBL-206ENST00000509429 ARHGAP1Q07960 439 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 ACSM2AQ08AH3 577 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 ZP4Q12836 540 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 TNK1Q13470 666 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 CTTNQ14247 550 aaKnown RBP4.07□□□□□ -1.76
NIPBL-206ENST00000509429 PSG5Q15238 335 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 SPA17Q15506 151 aa4.07□□□□□ -1.76
NIPBL-206ENST00000509429 CARTPTQ16568 116 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms