RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 TMEM200CA6NKL6 621 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 H3BMH7 237 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 NKX2-8O15522 239 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 LANCL1O43813 399 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 CDC40O60508 579 aaKnown RBP eCLIP7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 MPC2O95563 127 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 TXNDC12O95881 172 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 UGT2B10P36537 528 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 MAP4K2Q12851 820 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 KEAP1Q14145 624 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 GPR176Q14439 515 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 FAM27D1Q5T7N8 215 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 ARL9Q6T311 187 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 FAM198BQ6UWH4 519 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 ZNF730Q6ZMV8 503 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 CAMKMTQ7Z624 323 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 CDRT4Q8N9R6 151 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 ADAMTS18Q8TE60 1221 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 GIMAP1Q8WWP7 306 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 SEC14L4Q9UDX3 406 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 C19orf53Q9UNZ5 99 aaPredicted RBP7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 TMEM5Q9Y2B1 443 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 FAM220BPB1ANY3 271 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 F8W036 122 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 CHP2O43745 196 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 OR2J2O76002 312 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 TFP02787 698 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 RLN2P04090 185 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 ATP1B1P05026 303 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 LPLP06858 475 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 RNF224P0DH78 156 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 PTHLHP12272 177 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 GGT2P36268 569 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 RFC3P40938 356 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 CCL11P51671 97 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 RGS8P57771 180 aaPredicted RBP7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 SLC3A1Q07837 685 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 SQSTM1Q13501 440 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 IRAK1BP1Q5VVH5 260 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 LYPD4Q6UWN0 246 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 MSANTD1Q6ZTZ1 278 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 MED25Q71SY5 747 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 ARHGEF39Q8N4T4 335 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 OR11H7Q8NGC8 314 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 TM9SF4Q92544 642 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 RFT1Q96AA3 541 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 LIN37Q96GY3 246 aaPredicted RBP7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 MS4A3Q96HJ5 214 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 SLC46A1Q96NT5 459 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 OPALINQ96PE5 141 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 THAP7Q9BT49 309 aaPredicted RBP7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 HHATLQ9HCP6 504 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 P4HTMQ9NXG6 502 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 MMACHCQ9Y4U1 282 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 NEUROG3Q9Y4Z2 214 aa7.92□□□□□ -1.14
LIMCH1-209ENST00000509277 TRBV5-3A0A0A0MS03 114 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 DUXAA6NLW8 204 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 B4E171 279 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 OR5F1O95221 314 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 RECKO95980 971 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 ITGAMP11215 1152 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 RAB3AP20336 220 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 TSPAN7P41732 249 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 DECR1Q16698 335 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 ZNF630Q2M218 657 aaPredicted RBP7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 LGALSLQ3ZCW2 172 aaPredicted RBP7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 METTL11BQ5VVY1 283 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 PLAG1Q6DJT9 500 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 LINGO2Q7L985 606 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 THOC3Q96J01 351 aaKnown RBP7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 LRR1Q96L50 414 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 TBL1XR1Q9BZK7 514 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 MIXL1Q9H2W2 232 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 PIGUQ9H490 435 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 GORASP2Q9H8Y8 452 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 KLRF1Q9NZS2 232 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 FBXL4Q9UKA2 621 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 STUB1Q9UNE7 303 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 PCDHGB1Q9Y5G3 927 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 HS3ST3B1Q9Y662 390 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 PRAMEF27A3QJZ7 478 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 DVL2O14641 736 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 FABP1P07148 127 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 EMDP50402 254 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 FBXW4P57775 412 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 ASAH1Q13510 395 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 DOC2BQ14184 412 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 RBM39Q14498 530 aaKnown RBP7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 SMCO1Q147U7 214 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 PLBD1Q6P4A8 553 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 QSOX2Q6ZRP7 698 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 ZNF367Q7RTV3 350 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 TMPRSS12Q86WS5 348 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 TCTE3Q8IZS6 198 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 OR2Y1Q8NGV0 311 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 SLC39A7Q92504 469 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 KCTD12Q96CX2 325 aaKnown RBP7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 GIMAP5Q96F15 307 aa7.91□□□□□ -1.14
LIMCH1-209ENST00000509277 RBP7Q96R05 134 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms