RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 SLC26A3P40879 764 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 CSNK1DP48730 415 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 TDGF1P3P51864 188 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 ACVR1Q04771 509 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 LRRC74AQ0VAA2 488 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 BST2Q10589 180 aaKnown RBP2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 KIAA0087Q14695 138 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 TRIM40Q6P9F5 258 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 COX15Q7KZN9 410 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 KIR2DL5AQ8N109 375 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 SLC34A3Q8N130 599 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 VN1R2Q8NFZ6 395 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 OR2L3Q8NG85 312 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 OR10G9Q8NGN4 311 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 OR6X1Q8NH79 312 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 KIR2DL5BQ8NHK3 375 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 AKR7LQ8NHP1 331 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 HSFY1Q96LI6 401 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 OR2M2Q96R28 347 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 HES7Q9BYE0 225 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 DEFB127Q9H1M4 99 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 SLC2A8Q9NY64 477 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 NEU3Q9UQ49 428 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 SLC31A2O15432 143 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 MOSP00540 346 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 IGHV2-5P01817 119 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 ALDOBP05062 364 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 C2P06681 752 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 CCNCP24863 283 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 IFNA8P32881 189 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 ATP5C1P36542 298 aaKnown RBP2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 NPBWR2P48146 333 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 FBXW4P57775 412 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 KCNJ2P63252 427 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 ARHGAP19Q14CB8 494 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 LRRC10Q5BKY1 277 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 CCDC183Q5T5S1 534 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 FRMPD2BQ6IN97 320 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZNF530Q6P9A1 599 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 THOC6Q86W42 341 aaKnown RBP2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 CDR2LQ86X02 465 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 CNPY4Q8N129 248 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZADH2Q8N4Q0 377 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 CCDC54Q8NEL0 328 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 NPBQ8NG41 125 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 OR4F15Q8NGB8 312 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 OR2G2Q8NGZ5 317 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 SLC2A14Q8TDB8 520 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 MCOLN3Q8TDD5 553 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 BLOC1S5Q8TDH9 187 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 ACER1Q8TDN7 264 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 SH3GL1Q99961 368 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 TMEM59Q9BXS4 323 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 CLMPQ9H6B4 373 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZFP14Q9HCL3 533 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 KLHL28Q9NXS3 571 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 SPATA7Q9P0W8 599 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 XCL2Q9UBD3 114 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 RABL2BQ9UNT1 228 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 TP53TG5Q9Y2B4 290 aa2.7□□□□□ -1.98
HMGB1P28-201ENST00000507778 CDHR2Q9BYE9 1310 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 NKX2-6A6NCS4 301 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 A6NDX4 124 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 FAM47DPA6NHR8 397 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 SOX15O60248 233 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 UPK3AO75631 287 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 CIB2O75838 187 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 SERPIND1P05546 499 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 UQCRFS1P1P0C7P4 283 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 PNMA6AP0CW24 399 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 RPS2P15880 293 aaKnown RBP2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 MDKP21741 143 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 RORAP35398 523 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 GPR6P46095 362 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 RPS10P46783 165 aaKnown RBP2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 PLP1P60201 277 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 TGFBIQ15582 683 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 RFX4Q33E94 735 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 LCN12Q6JVE5 192 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 CNIH2Q6PI25 160 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZNF621Q6ZSS3 439 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 SLC25A48Q6ZT89 311 aaKnown RBP2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZNF429Q86V71 674 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 FAM228AQ86W67 206 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 CDH26Q8IXH8 852 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 PUSL1Q8N0Z8 303 aaKnown RBP2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZNF557Q8N988 423 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 Q8N9W7 124 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 OR2G3Q8NGZ4 309 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 KCNG3Q8TAE7 436 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZNF799Q96GE5 643 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 KCTD14Q9BQ13 255 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 SLC25A37Q9NYZ2 338 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 MSH6P52701 1360 aa2.69□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZNF318Q5VUA4 2279 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 CROCCQ5TZA2 2017 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 TRIM64CA6NLI5 447 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 CCDC169A6NNP5 214 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 FAM166BA8MTA8 275 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 DYNC1I1O14576 645 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms